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Megahertz single-particle imaging at the European XFEL
Title Megahertz single-particle imaging at the European XFEL Author Sobolev E. Co-authors Zolotarev S. Giewekemeyer K. Bielecki J. Okamoto K. Barák Imrich SAVMOBIO - Ústav molekulárnej biológie SAV ORCID Maia Filip R.N.C. Source document Communications Physics. Vol. 3 (2020), no. 97 Language eng - English Document kind rozpis článkov z periodík (rbx) Citations BOBKOV, S.A. - TESLYUK, A.B. - BAYMUKHAMETOV, T.N. - PICHKUR, E.B. - CHESNOKOV, Y.M. - ASSALAUOVA, D. - POYDA, A.A. - NOVIKOV, A.M. - ZOLOTAREV, S.I. - IKONNIKOVA, K.A. - VELIKHOV, V.E. - VARTANYANTS, I.A. - VASILIEV, A.L. - ILYIN, V.A. Advances in Modern Information Technologies for Data Analysis in CRYO-EM and XFEL Experiments. In CRYSTALLOGRAPHY REPORTS. ISSN 1063-7745, NOV 2020, vol. 65, no. 6, p. 1081-1092. Dostupné na: https://doi.org/10.1134/S1063774520060085. KOZLOV, A. - GUREYEV, T.E. - PAGANIN, D.M. - MARTIN, A.V. - CALEMAN, C. - QUINEY, H.M. Recovery of undamaged electron-density maps in the presence of damage-induced partial coherence in singe-particle imaging. In IUCRJ. ISSN 2052-2525, NOV 2020, vol. 7, 6, p. 1114-1123. ASSALAUOVA, D. - KIM, Y.Y. - BOBKOV, S. - KHUBBUTDINOV, R. - ROSE, M. - ALVAREZ, R. - ANDREASSON, J. - BALAUR, E. - CONTRERAS, A. - DEMIRCI, H. - GELISIO, L. - HAJDU, J. - HUNTER, M.S. - KURTA, R.P. - LI, H.Y. - MCFADDEN, M. - NAZARI, R. - SCHWANDER, P. - TESLYUK, A. - WALTER, P. - XAVIER, P.L. - YOON, C.H. - ZAARE, S. - ILYIN, V.A. - KIRIAN, R.A. - HOGUE, B.G. - AQUILA, A. - VARTANYANTS, I.A. An advanced workflow for single-particle imaging with the limited data at an X-ray free-electron laser. In IUCRJ. ISSN 2052-2525, NOV 2020, vol. 7, 6, p. 1102-1113. Dostupné na: https://doi.org/10.1107/S2052252520012798. VAKILI, M. - VASIREDDI, R. - GWOZDZ, P.V. - MONTEIRO, D.C.F. - HEYMANN, M. - BLICK, R.H. - TREBBIN, M. Microfluidic polyimide gas dynamic virtual nozzles for serial crystallography. In REVIEW OF SCIENTIFIC INSTRUMENTS. ISSN 0034-6748, AUG 1 2020, vol. 91, no. 8. Dostupné na: https://doi.org/10.1063/5.0012806. ARNAL, R.D. - WOJTAS, D.H. - MILLANE, R.P. Progress towards imaging biological filaments using X-ray free-electron lasers. In 2020 35TH INTERNATIONAL CONFERENCE ON IMAGE AND VISION COMPUTING NEW ZEALAND (IVCNZ). ISSN 2151-2191, 2020, 9290623. PETROVA, T. E. - LUNIN, V. Y. Determination of the Structure of Biological Macromolecular Particles Using X-Ray Lasers. Achievements and Prospects. In Mathematical Biology and Bioinformatics, 2020-01-01, 15, 2, pp. 195-234. PROSEKOV, P.A. - NOSIK, V.L. - BLAGOV, A.E. Methods of Coherent X-Ray Diffraction Imaging. In CRYSTALLOGRAPHY REPORTS. ISSN 1063-7745, NOV 2021, vol. 66, no. 6, p. 867-882. SINELNIKOVA, A. - MANDL, T. - OSTLIN, C. - GRANAS, O. - BRODMERKEL, M.N. - MARKLUND, E.G. - CALEMAN, C. Reproducibility in the unfolding process of protein induced by an external electric field. In CHEMICAL SCIENCE. ISSN 2041-6520, FEB 14 2021, vol. 12, no. 6, p. 2030-2038. HARDER, R. Deep neural networks in real-time coherent diffraction imaging. In IUCRJ. ISSN 2052-2525, JAN 2021, vol. 8, 1, p. 1-3. WU, L.L. - JUHAS, P. - YOO, S. - ROBINSON, I. Complex imaging of phase domains by deep neural networks. In IUCRJ. ISSN 2052-2525, JAN 2021, vol. 8, 1, p. 12-21. KLIMESOVA, E. - KULYK, O. - DITTRICH, L. - ANDREASSON, J. - KRIKUNOVA, M. Nanoparticle-assisted acceleration of laser-irradiated low-density He ions. In PHYSICAL REVIEW A. ISSN 2469-9926, DEC 27 2021, vol. 104, no. 6. Dostupné na: https://doi.org/10.1103/PhysRevA.104.L061101. LEE, S.Y. - CHO, D. - JUNG, C. - SUNG, D. - NAM, D. - KIM, S. - SONG, C.Y. Denoising low-intensity diffraction signals using k-space deep learning: Applications to phase recovery. In PHYSICAL REVIEW RESEARCH. OCT 22 2021, vol. 3, no. 4. Dostupné na: https://doi.org/10.1103/PhysRevResearch.3.043066. KLIMESOVA, E. - KULYK, O. - HOQUE, Z. - ROOS, A.H. - KHAKUREL, K.P. - REBARZ, M. - JURKOVIC, M. - ALBRECHT, M. - FINKE, O. - LERA, R. - HORT, O. - MAI, D.D. - NEJDL, J. - SOKOL, M. - FINK, R.B. - BEN LTAIEF, L. - WESTPHAL, D. - WOLF, A. - LASTOVICKA, T. - FRASSETTO, F. - POLETTO, L. - ANDREASSON, J. - KRIKUNOVA, M. A multipurpose end-station for atomic, molecular and optical sciences and coherent diffractive imaging at ELI beamlines. In EUROPEAN PHYSICAL JOURNAL-SPECIAL TOPICS. ISSN 1951-6355, DEC 2021, vol. 230, no. 23, SI, p. 4183-4194. Dostupné na: https://doi.org/10.1140/epjs/s11734-021-00192-z. IGNATENKO, A. - ASSALAUOVA, D. - BOBKOV, S.A. - GELISIO, L. - TESLYUK, A.B. - ILYIN, V.A. - VARTANYANTS, I.A. Classification of diffraction patterns in single particle imaging experiments performed at x-ray free-electron lasers using a convolutional neural network. In MACHINE LEARNING-SCIENCE AND TECHNOLOGY. JUN 2021, vol. 2, no. 2. Dostupné na: https://doi.org/10.1088/2632-2153/abd916. 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X-ray-Based Techniques to Study the Nano-Bio Interface. In ACS NANO. ISSN 1936-0851, MAR 23 2021, vol. 15, no. 3, p. 3754-3807. Dostupné na: https://doi.org/10.1021/acsnano.0c09563. HAN, H. - ROUND, E. - SCHUBERT, R. - GUL, Y. - MAKROCZYOVA, J. - MEZA, D. - HEUSER, P. - AEPFELBACHER, M. - BARAK, I. - BETZEL, C. - FROMME, P. - KURSULA, I. - NISSEN, P. - TERESCHENKO, E. - SCHULZ, J. - UETRECHT, C. - ULICN, J. - WILMANNS, M. - HAJDU, J. - LAMZIN, V.S. - LORENZEN, K. The XBI BioLab for life science experiments at the European XFEL. In JOURNAL OF APPLIED CRYSTALLOGRAPHY. ISSN 0021-8898, FEB 2021, vol. 54, 1, p. 7-21. Dostupné na: https://doi.org/10.1107/S1600576720013989. SHEN, Z. - TEO, C.Z.W. - AYYER, K. - LOH, N.D. An encryption-decryption framework to validating single-particle imaging. In SCIENTIFIC REPORTS. ISSN 2045-2322, JAN 13 2021, vol. 11, no. 1. CRUZ-CHU, E.R. - HOSSEINIZADEH, A. - MASHAYEKHI, G. - FUNG, R. - OURMAZD, A. - SCHWANDER, P. 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KOMOROWSKI, K. - PREOBRASCHENSKI, J. - GANZELLA, M. - ALFKEN, J. - NEUHAUS, C. - JAHN, R. - SALDITT, T. Neurotransmitter uptake of synaptic vesicles studied by X-ray diffraction. In EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS. ISSN 0175-7571, SEP 2022, vol. 51, no. 6, p. 465-482. YOUNG, B.D. - COOK, M.E. - COSTABILE, B.K. - SAMANTA, R. - ZHUANG, X.H. - SEVDALIS, S.E. - VARNEY, K.M. - MANCIA, F. - MATYSIAK, S. - LATTMAN, E. - WEBER, D.J. Binding and Functional Folding (BFF): A Physiological Framework for Studying Biomolecular Interactions and Allostery. In JOURNAL OF MOLECULAR BIOLOGY. ISSN 0022-2836, DEC 15 2022, vol. 434, no. 23. Category ADCA - Scientific papers in foreign journals registered in Current Contents Connect with IF (impacted) Category of document (from 2022) V3 - Vedecký výstup publikačnej činnosti z časopisu Type of document článok Year 2020 Registered in WOS Registered in SCOPUS Registered in CCC DOI 10.1038/s42005-020-0362-y 
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File name Access Size Downloaded Type License Megahertz single-particle imaging at the European.pdf available 2.1 MB 0 Publisher's version rok CC IF IF Q (best) JCR Av Jour IF Perc SJR SJR Q (best) CiteScore A rok vydania rok metriky IF IF Q (best) SJR SJR Q (best) 2020 2019 4.684 Q1 2.310 Q1
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