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A SARS-CoV-2 mutant from B.1.258 lineage with ∆H69/∆V70 deletion in the Spike protein circulating in Central Europe in the fall 2020
Title A SARS-CoV-2 mutant from B.1.258 lineage with ∆H69/∆V70 deletion in the Spike protein circulating in Central Europe in the fall 2020 Author Brejová Broňa Co-authors Boršová Kristína SAVBIOMED ; SAVVIR - Biomedicínske centrum SAV Hodorová Viktória Čabanová Viktória SAVBIOMED ; SAVVIR - Biomedicínske centrum SAV ORCID Reizigová Lenka Paul D. Evan Čekan Pavol Klempa Boris 1976 SAVBIOMED ; SAVVIR - Biomedicínske centrum SAV SCOPUS ORCID Nosek Jozef Vinař Tomáš Source document Virus Genes. Vol. 57, no. 6 (2021), p. 556–560 Language eng - English Country US - United States of America Note open access URL URL link Document kind rozpis článkov z periodík (rbx) Citations TIAN, D.D. - SUN, Y.H. - ZHOU, J.M. - YE, Q. The global epidemic of SARS-CoV-2 variants and their mutational immune escape. In JOURNAL OF MEDICAL VIROLOGY. ISSN 0146-6615, MAR 2022, vol. 94, no. 3, p. 847-857. Dostupné na: https://doi.org/10.1002/jmv.27376. GIOVACCHINI, N. - COPPI, M. - AIEZZA, N. - BACCANI, I. - MALENTACCHI, F. - POLLINI, S. - ANTONELLI, A. - ROSSOLINI, G.M. Rapid screening for SARS-CoV-2 VOC-Alpha (202012/01, B.1.1.7) using the Allplex (TM) SARS-CoV-2/FluA/FluB/RSV Assay. In INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES. ISSN 1201-9712, DEC 2021, vol. 113, p. 207-209. Dostupné na: https://doi.org/10.1016/j.ijid.2021.10.005. SINGH, D.D. - PARVEEN, A. - YADAV, D.K. SARS-CoV-2: Emergence of New Variants and Effectiveness of Vaccines. In FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY. ISSN 2235-2988, DEC 14 2021, vol. 11. Dostupné na: https://doi.org/10.3389/fcimb.2021.777212. KONKA, A. - LEJAWA, M. - GAZDZICKA, J. - BOCHENEK, A. - FRONCZEK, M. - STRZELCZYK, J.K. RT-PCR Detection of SARS-CoV-2 among Individuals from the Upper Silesian Region-Analysis of 108,516 Tests. In DIAGNOSTICS. JAN 2022, vol. 12, no. 1. Dostupné na: https://doi.org/10.3390/diagnostics12010007. BAYIRLI-TURAN, D. - USANMAZ, M. - GORGUN, S. - YOLCU, E. - SAHIN, C. - BILENOGLU, O. - ISBILEN, M. - YILDIZ, E. The Prevalence of Protein S Variant in Patients Diagnosed with COVID-19. In CLINICAL LABORATORY. ISSN 1433-6510, 2022 JAN 27 2022. Dostupné na: https://doi.org/10.7754/Clin.Lab.2022.211212. DOLCI, M. - SIGNORINI, L. - CASON, C. - CAMPISCIANO, G. - KUNDERFRANCO, P. - PARIANI, E. - GALLI, C. - PETIX, V. - FERRANTE, P. - DELBUE, S. - COMAR, M. Circulation of SARS-CoV-2 Variants among Children from November 2020 to January 2022 in Trieste (Italy). In MICROORGANISMS. MAR 2022, vol. 10, no. 3. Dostupné na: https://doi.org/10.3390/microorganisms10030612. BOZIDIS, P. - TSAOUSI, E.T. - KOSTOULAS, C. - SAKALOGLOU, P. - GOUNI, A. - KOUMPOULI, D. - SAKKAS, H. - GEORGIOU, I. - GARTZONIKA, K. Unusual N Gene Dropout and Ct Value Shift in Commercial Multiplex PCR Assays Caused by Mutated SARS-CoV-2 Strain. In DIAGNOSTICS. APR 2022, vol. 12, no. 4. Dostupné na: https://doi.org/10.3390/diagnostics12040973. BOCCIA, A. - TUFANO, R. - FERRUCCI, V. - SEPE, L. - BIANCHI, M. - PASCARELLA, S. - ZOLLO, M. - PAOLELLA, G. SARS-CoV-2 Pandemic Tracing in Italy Highlights Lineages with Mutational Burden in Growing Subsets. In INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. APR 2022, vol. 23, no. 8. Dostupné na: https://doi.org/10.3390/ijms23084155. GUERRERO-PRESTON, R. - RIVERA-AMILL, V. - CARABALLO, K. - RODRIGUEZ-TORRES, S. - PURCELL-WILTZ, A. - GARCIA, A.A. - TORRES, R.S. - ZAMUNER, F.T. - ZANETTINI, C. - MACKAY, M.J. - BAITS, R. - SALGADO, D. - KHULLAR, G. - METTI, J. - BAKER, T. - DUDLEY, J. - VALE, K. - PEREZ, G. - DE JESUS, L. - MIRANDA, Y. - ORTIZ, D. - GARCIA-NEGRON, A. - VIERA, L. - ORTIZ, A. - CANABAL, J.A. - ROMAGUERA, J. - JIMENEZ-VELAZQUEZ, I. - MARCHIONNI, L. - RODRIGUEZ-ORENGO, J.F. - BAEZ, A. - MASON, C.E. - SIDRANSKY, D. Precision health diagnostic and surveillance network uses S gene target failure (SGTF) combined with sequencing technologies to track emerging SARS-CoV-2 variants. In IMMUNITY INFLAMMATION AND DISEASE. JUN 2022, vol. 10, no. 6. Dostupné na: https://doi.org/10.1002/iid3.634. LAI, E. - KENNEDY, E.B. - LOZACH, J. - HAYASHIBARA, K. - DAVIS-TURAK, J. - BECKER, D. - BRZOSKA, P. - CASSENS, T. - DIAMOND, E. - GANDHI, M. - GRENINGER, A.L. - HAJIAN, P. - LEONETTI, N.A. - NGUYEN, J.M. - O'DONOVAN, K.M.C. - PECK, T. - RAMIREZ, J.M. - ROYCHOUDHURY, P. - SANDOVAL, E. - WESSELMAN, C. - WESSELMAN, T. - WHITE, S. - WILLIAMS, S. - WONG, D. - YU, Y.F. - CREAGER, R.S. A Method for Variant Agnostic Detection of SARS-CoV-2, Rapid Monitoring of Circulating Variants, and Early Detection of Emergent Variants Such as Omicron. In JOURNAL OF CLINICAL MICROBIOLOGY. ISSN 0095-1137, JUL 20 2022, vol. 60, no. 7. Dostupné na: https://doi.org/10.1128/jcm.00342-22. DE MARCO, C. - VENEZIANO, C. - MASSACCI, A. - PALLOCCA, M. - MARASCIO, N. - QUIRINO, A. - BARRECA, G.S. - GIANCOTTI, A. - GALLO, L. - LAMBERTI, A.G. - QUARESIMA, B. - SANTAMARIA, G. - BIAMONTE, F. - SCICCHITANO, S. - TRECARICHI, E.M. - RUSSO, A. - TORELLA, D. - QUATTRONE, A. - TORTI, C. - MATERA, G. - DE FILIPPO, C. - COSTANZO, F.S. - VIGLIETTO, G. Dynamics of Viral Infection and Evolution of SARS-CoV-2 Variants in the Calabria Area of Southern Italy. In FRONTIERS IN MICROBIOLOGY. JUL 28 2022, vol. 13. Dostupné na: https://doi.org/10.3389/fmicb.2022.934993. SILVA, C.S. - TRYNDYAK, V.P. - CAMACHO, L. - ORLOFF, M.S. - PORTER, A. - GARNER, K. - MULLIS, L. - AZEVEDO, M. Temporal dynamics of SARS-CoV-2 genome and detection of variants of concern in wastewater influent from two metropolitan areas in Arkansas. In SCIENCE OF THE TOTAL ENVIRONMENT. ISSN 0048-9697, NOV 25 2022, vol. 849. Dostupné na: https://doi.org/10.1016/j.scitotenv.2022.157546. SISERMAN, C.V. - JEICAN, I.I. - GHEBAN, D. - ANTON, V. - MIRONESCU, D. - SUSMAN, S. - VICA, M.L. - LAZAR, M. - ALUAS, M. - TOADER, C. - ALBU, S. Fatal Form of COVID-19 in a Young Male Bodybuilder Anabolic Steroid Using: The First Autopsied Case. In MEDICINA-LITHUANIA. ISSN 1010-660X, OCT 2022, vol. 58, no. 10. Dostupné na: https://doi.org/10.3390/medicina58101373. KOK, K.H. - WONG, S.C. - CHAN, W.M. - WEN, L. - CHU, A.W.H. - IP, J.D. - LEE, L.K. - WONG, I.T.F. - LO, H.W.H. - CHENG, V.C.C. - HO, A.Y.M. - LAM, B.H.S. - TSE, H. - LUNG, D. - NG, K.N.H.L. - AU, A.K.W. - SIU, G.K.H. - YUEN, K.Y. Co-circulation of two SARS-CoV-2 variant strains within imported pet hamsters in Hong Kong. In EMERGING MICROBES & INFECTIONS. DEC 31 2022, vol. 11, no. 1, p. 689-698. Dostupné na: https://doi.org/10.1080/22221751.2022.2040922. CHRYSOSTOMOU, A.C. - VRANCKEN, B. - HARALAMBOUS, C. - ALEXANDROU, M. - ARISTOKLEOUS, A. - CHRISTODOULOU, C. - GREGORIOU, I. - IOANNIDES, M. - KALAKOUTA, O. - KARAGIANNIS, C. - KOUMBARIS, G. - LOIZIDES, C. - MENDRIS, M. - PAPASTERGIOU, P. - PATSALIS, P.C. - PIERIDOU, D. - RICHTER, J. - SCHMITT, M. - SHAMMAS, C. - STYLIANOU, D.C. - THEMISTOKLEOUS, G. - COMESSAR NETWORK - LEMEY, P. - KOSTRIKIS, L.G. Genomic Epidemiology of the SARS-CoV-2 Epidemic in Cyprus from November 2020 to October 2021: The Passage of Waves of Alpha and Delta Variants of Concern. In VIRUSES-BASEL. JAN 2023, vol. 15, no. 1. Dostupné na: https://doi.org/10.3390/v15010108. CHIARA, M. - HORNER, D.S. - FERRANDI, E. - GISSI, C. - PESOLE, G. HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2. In COMMUNICATIONS BIOLOGY. APR 22 2023, vol. 6, no. 1. Dostupné na: https://doi.org/10.1038/s42003-023-04784-4. MURILLO, E. - PALACIO-RUA, K. - AFANADOR-AYALA, C. - GARCIA-CORREA, J.F. - ZULUAGA, A.F. Validation of a new strategy for the identification of SARS-CoV-2 variants by sequencing the spike gene by Sanger. In ENFERMEDADES INFECCIOSAS Y MICROBIOLOGIA CLINICA. ISSN 0213-005X, MAY 2023, vol. 41, no. 5, p. 284-289. Dostupné na: https://doi.org/10.1016/j.eimc.2022.04.014. Category ADCA - Scientific papers in foreign journals registered in Current Contents Connect with IF (impacted) Category of document (from 2022) V3 - Vedecký výstup publikačnej činnosti z časopisu Type of document článok Year 2021 Registered in WOS Registered in SCOPUS Registered in CCC DOI 10.1007/s11262-021-01866-5 
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rok CC IF IF Q (best) JCR Av Jour IF Perc SJR SJR Q (best) CiteScore A rok vydania rok metriky IF IF Q (best) SJR SJR Q (best) 2021 2020 2.332 Q3 0.642 Q2
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