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A re-appraisal of the diversity of the methanogens associated with the rumen ciliates
Title A re-appraisal of the diversity of the methanogens associated with the rumen ciliates Author Regensbogenová Martina SAVFYHOZ - Ústav fyziológie hospodárskych zvierat SAV Co-authors McEwan NR Javorský Peter 1950-2021 SAVFYHOZ - Ústav fyziológie hospodárskych zvierat SAV RID ORCID Kišidayová Svetlana 1959 SAVFYHOZ - Ústav fyziológie hospodárskych zvierat SAV SCOPUS RID ORCID Michalowski T. Newbold CJ Hackstein JHP Pristaš Peter 1962 SAVFYHOZ - Ústav fyziológie hospodárskych zvierat SAV SCOPUS RID ORCID Source document FEMS Microbiology Letters. Vol. 238, no. 2 (2004), p. 307-313 Language eng - English Country GB - Great Britian Document kind rozpis článkov z periodík (rbx) Citations HIRST, M.B. - KITA, K.N. - DAWSON, S.C. Uncultivated microbial eukaryotic diversity: A method to link ssu rRNA gene sequences with morphology. In PLoS ONE, 2011, vol.6, no.12. USHIDA, K. Symbiotic methanogens and Rumen Ciliates. In (ENDO)SYMBIOTIC METHANOGENIC ARCHAEA, Microbiology monographs 19, Berlin,Springer-Verlag 2010, ISBN 978-3-642-13614-6, p. 25-34 SUNDSET, M.A. - EDWARDS, J.E. - CHENG, Y.F. - SENOSIAIN, R.S. - FRAILE, M.N. - NORTHWOOD, K.S. - PRAESTENG, K.E. - GLAD, T. - MATHIESEN, S.D. - WRIGHT, A.D.G. Rumen microbial diversity in Svalbard reindeer, with particular emphasis on methanogenic archaea. In FEMS MICROBIOLOGY ECOLOGY. ISSN 0168-6496, DEC 2009, vol. 70, no. 3, p. 553-562. KUMAR, S. - PUNIYA, A.K. - PUNIYA, M. - DAGAR, S.S. - SIROHI, S.K. - SINGH, K. - GRIFFITH, G.W. Factors affecting rumen methanogens and methane mitigation strategies. In WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY. ISSN 0959-3993, SEP 2009, vol. 25, no. 9, p. 1557-1566. SUNDSET, M. - EDWARDS, J. - CHENG, Y. - SENOSIAIN, R. - FRAILE, M. - NORTHWOOD, K. - PRAESTENG, K.E. - GLAD, T. - MATHIESEN, S. - WRIGHT, A.D. Molecular Diversity of the Rumen Microbiome of Norwegian Reindeer on Natural Summer Pasture. In MICROBIAL ECOLOGY. ISSN 0095-3628, FEB 2009, vol. 57, no. 2, p. 335-348. DENG, W.D. - XI, D.M. - MAO, H.M. - WANAPAT, M. The use of molecular techniques based on ribosomal RNA and DNA for rumen microbial ecosystem studies: a review. In MOLECULAR BIOLOGY REPORTS. ISSN 0301-4851, JUN 2008, vol. 35, no. 2, p. 265-274. MITSUMORI, M. - SUN, W. Control of rumen microbial fermentation for mitigating methane emissions from the rumen. In ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES. ISSN 1011-2367, JAN 2008, vol. 21, no. 1, p. 144-154. OHENE-ADJEI, S. - TEATHER, R.M. - IVANJ, M. - FORSTER, R.J. Postinoculation protozoan establishment and association patterns of methanogenic archaea in the ovine rumen. In APPLIED AND ENVIRONMENTAL MICROBIOLOGY. ISSN 0099-2240, JUL 2007, vol. 73, no. 14, p. 4609-4618. WRIGHT, A.D.G. - AUCKLAND, C.H. - LYNN, D.H. Molecular diversity of methanogens in feedlot cattle from Ontario and Prince Edward Island, Canada. In APPLIED AND ENVIRONMENTAL MICROBIOLOGY. ISSN 0099-2240, JUL 2007, vol. 73, no. 13, p. 4206-4210. DENG, W.D. - WANAPAT, M. - MA, S.C. - CHEN, J. - XI, D.M. - HE, T.B. - YANG, Z.F. - MAO, H.M. Phylogenetic analysis of 16S rDNA sequences manifest rumen bacterial diversity in gayals (Bos frontalis) fed fresh bamboo leaves and twigs (Sinarumdinaria). In ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES. ISSN 1011-2367, JUL 2007, vol. 20, no. 7, p. 1057-1066. TÓTHOVÁ, T. Eubakteriálny symbiont pôdneho prvoka Kahliella spp. In Vedecké práce doktorandov: zborník zo seminára doktorandov venovaného pamiatke akademika Boďu. ISBN 978-80-969788-4-7, 2007, II. ročník, Košic ÚFHZ-SAV, s. 112-115 WRIGHT, A.D.G. - TOOVEY, A.F. - PIMM, C.L. Molecular identification of methanogenic archaea from sheep in Queensland, Australia reveal more uncultured novel archaea. In ANAEROBE. ISSN 1075-9964, JUN 2006, vol. 12, no. 3, p. 134-139. CHABAN, B. - NG, S.Y.M. - JARRELL, K.F. Archaeal habitats - from the extreme to the ordinary. In CANADIAN JOURNAL OF MICROBIOLOGY. ISSN 0008-4166, FEB 2006, vol. 52, no. 2, p. 73-116. SKILLMAN, L.C. - EVANS, P.N. - STROMPL, C. - JOBLIN, K.N. 16S rDNA directed PCR primers and detection of methanogens in the bovine rumen. In LETTERS IN APPLIED MICROBIOLOGY. ISSN 0266-8254, MAR 2006, vol. 42, no. 3, p. 222-228. ZHOU, M. - MCALLISTER, T.A. - GUAN, L.L. Molecular identification of rumen methanogens: Technologies, advances and prospects. In ANIMAL FEED SCIENCE AND TECHNOLOGY. ISSN 0377-8401, JUN 23 2011, vol. 166-67, Sp. Iss. SI, p. 76-86. TYMENSEN, Lisa D. - BEAUCHEMIN, Karen A. - MCALLISTER, Tim A. Structures of free-living and protozoa-associated methanogen communities in the bovine rumen differ according to comparative analysis of 16S rRNA and mcrA genes. MICROBIOLOGY-SGM. ISSN 1350-0872, JUL 2012, vol. 158, Part 7, p. 1808-1817. TYMENSEN, Lisa D. - MCALLISTER, Tim A. Community Structure Analysis of Methanogens Associated with Rumen Protozoa Reveals Bias in Universal Archaeal Primers. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. ISSN 0099-2240, JUN 2012, vol. 78, no. 11, p. 4051-4056. LIU, C. - ZHU, Z. P. - LIU, Y. F. - GUO, T. J. - DONG, H. M. Diversity and abundance of the rumen and fecal methanogens in Altay sheep native to Xinjiang and the influence of diversity on methane emissions. ARCHIVES OF MICROBIOLOGY. ISSN 0302-8933, MAY 2012, vol. 194, no. 5, p. 353-361. OZUTSUMI, Yuhei - TAJIMA, Kiyoshi - TAKENAKA, Akio - ITABASHI, Hisao. The mcrA gene and 16S rRNA gene in the phylogenetic analysis of methanogens in the rumen of faunated and unfaunated cattle. ANIMAL SCIENCE JOURNAL. ISSN 1344-3941, NOV 2012, vol. 83, no. 11, p. 727-734. SINGH, K. - PANDYA, P. R. - TRIPATHI, A.K. - PATEL, G.R. - PARNERKAR, S. - KOTHARI, R.K. - JOSHI, C.G. Molecular diversity of protozoa in rumen of Indian buffalo (Bubalus bubalis). In AGRICULTURAL RESEARCH. ISSN 2249-720X, 2013, vol. 2, no. 4, p. 360-366, DOI: 10.1007/s40003-013-0071-9 LWIN, Khin-Ohnmar - MATSUI, Hiroki. Comparative Analysis of the Methanogen Diversity in Horse and Pony by Using mcrA Gene and Archaeal 16S rRNA Gene Clone Libraries. In ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL. ISSN 1472-3646, 2014, vol., no., pp. XIA, Y. - KONG, Y. H. - SEVIOUR, R. - FORSTER, R. J. - KISIDAYOVA, S. - MCALLISTER, T. A. Fluorescence in situ hybridization probing of protozoal Entodinium spp. and their methanogenic colonizers in the rumen of cattle fed alfalfa hay or triticale straw. In JOURNAL OF APPLIED MICROBIOLOGY. ISSN 1364-5072, 2014, vol. 116, no. 1, pp. 14. SZUMACHER- STRABEL, M. – CIEŚLAK, A. Chapter 9: Dietary possibilities to mitigate rumen methane and ammonia production. In: GREENHOUSE GASES – CAPTURING UTILIZATION AND REDUCTION. ISBN 978-953-51-0192-5, In Tech 2012, p. 199-238, ed. Guoxiang Liu YANG, L. Y. - CHEN, J. - CHENG, X. L. - XI, D. M. - YANG, S. L. - DENG, W. D. - MAO, H. M. Phylogenetic analysis of 16S rRNA gene sequences reveals rumen bacterial diversity in Yaks (Bos grunniens). MOLECULAR BIOLOGY REPORTS. ISSN 0301-4851, JAN 2010, vol. 37, no. 1, p. 553-562. TOMKINS, N.W. - DENMAN, S.E. - PILAJUN, R. - WANAPAT, M. - MCSWEENEY, C.S. - ELLIOTT, R. Manipulating rumen fermentation and methanogenesis using an essential oil and monensin in beef cattle fed a tropical grass hay. ANIMAL FEED SCIENCE AND TECHNOLOGY. ISSN 0377-8401, FEB 2015, vol. 200, p. 25-34. ABRAR, A. - WATANABE, H. - KITAMURA, T. - KONDO, M. - BAN-TOKUDA, T. - MATSUI, H. Diversity and fluctuation in ciliate protozoan population in the rumen of cattle. ANIMAL SCIENCE JOURNAL. ISSN 1344-3941, SEP 2016, vol. 87, no. 9, p. 1188-1192. BELANCHE, A. - DE LA FUENTE, G. - NEWBOLD, C.J. Study of methanogen communities associated with different rumen protozoal populations. FEMS MICROBIOLOGY ECOLOGY. ISSN 0168-6496, DEC 2014, vol. 90, no. 3, p. 663-677. NG, Filomena - KITTELMANN, Sandra - PATCHETT, Mark L. - ATTWOOD, Graeme T. - JANSSEN, Peter H. - RAKONJAC, Jasna - GAGIC, Dragana. An adhesin from hydrogen-utilizing rumen methanogen Methanobrevibacter ruminantium M1 binds a broad range of hydrogen-producing microorganisms. In Environmental Microbiology. ISSN 14622912, 2016-01-01, 18, 9, pp. 3010-3021. ISHAQ, Suzanne L. - ALZAHAL, Ousama - WALKER, Nicola - MCBRIDE, Brian. An Investigation into Rumen Fungal and Protozoal Diversity in Three Rumen Fractions, during High-Fiber or Grain-Induced Sub-Acute Ruminal Acidosis Conditions, with or without Active Dry Yeast Supplementation. In FRONTIERS IN MICROBIOLOGY. ISSN 1664-302X, 2017, vol. 8, art. no. 1943. PATRA, Amlan - PARK, Tansol - KIM, Minseok - YU, Zhongtang. Rumen methanogens and mitigation of methane emission by anti-methanogenic compounds and substances. In JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY. ISSN 2049-1891, 2017, vol. 8, art. no. 13. TAPIO, Ilma - SNELLING, Timothy J. - STROZZI, Francesco - WALLACE, R. John. The ruminal microbiome associated with methane emissions from ruminant livestock. In JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY. ISSN 2049-1891, 2017, vol. 8, art. no. 7. PARK, Tansol - YU, Zhongtang. Do Ruminal Ciliates Select Their Preys and Prokaryotic Symbionts? In FRONTIERS IN MICROBIOLOGY. ISSN 1664-302X, 2018, vol. 9, pp. 1710. HACKSTEIN J.H.P., TIELENS A.G.M. Hydrogenosomes, p.193-222. IN: Hackstein J. (eds) (Endo)symbiotic Methanogenic Archaea. Microbiology Monographs, vol 19. Springer, Cham, 2018, ISSN 1862-5576 ISSN 1862-5584 (electronic), ISBN 978-3-319-98835-1 ISBN 978-3-319-98836-8 (eBook), https://doi.org/10.1007/978-3-319-98836-8. HACKSTEIN J.H.P., TIELENS A.G.M. Methanogens in the Gastrointestinal Tract of Animals, p. 121-152. IN: Hackstein J. (eds) (Endo)symbiotic Methanogenic Archaea. Microbiology Monographs, vol 19. Springer, Cham, 2018, ISSN 1862-5576 ISSN 1862-5584 (electronic), ISBN 978-3-319-98835-1 ISBN 978-3-319-98836-8 (eBook), https://doi.org/10.1007/978-3-319-98836-8. USHIDA, KAZUNARI. Symbiotic Methanogens and Rumen Ciliates, p.23-35. IN: Hackstein J. (eds) (Endo)symbiotic Methanogenic Archaea. Microbiology Monographs, vol 19. Springer, Cham, 2018, ISSN 1862-5576 ISSN 1862-5584 (electronic), ISBN 978-3-319-98835-1 ISBN 978-3-319-98836-8 (eBook), https://doi.org/10.1007/978-3-319-98836-8. HACKSTEIN J.H.P., DE GRAAF R.M., VAN HELLEMOND J.J., TIELENS A.G.M. Hydrogenosomes of Anaerobic Ciliates. IN Tachezy J. (eds) Hydrogenosomes and Mitosomes: Mitochondria of Anaerobic Eukaryotes. Microbiology Monographs, 2019, vol 9., Cham: Springer, DOI: https://doi.org/10.1007/978-3-030-17941-0_5. HYELADI I.M., TOSSENBERGER J., HALAS V., VÉGVÁRI G., KOVÁCS M., JÓCSÁK I.. PCR and qPCR-based applications in rumen microbiology research: a review. 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Category ADCA - Scientific papers in foreign journals registered in Current Contents Connect with IF (impacted) Category of document (from 2022) V3 - Vedecký výstup publikačnej činnosti z časopisu Type of document článok Year 2004 Registered in WOS Registered in SCOPUS DOI 10.1016/j.femsle.2004.07.049 
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