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Surveillance of SARS-CoV-2 lineage B.1.1.7 in Slovakia using a novel, multiplexed RT-qPCR assay
Title Surveillance of SARS-CoV-2 lineage B.1.1.7 in Slovakia using a novel, multiplexed RT-qPCR assay Author Boršová Kristína SAVBIOMED ; SAVVIR - Biomedicínske centrum SAV Co-authors Paul D. Evan Kováčová Viera SCOPUS RID ORCID Radvánszka Monika Hajdu Roman Čabanová Viktória SAVBIOMED ; SAVVIR - Biomedicínske centrum SAV ORCID Sláviková Monika 1970- SAVBIOMED ; SAVVIR - Biomedicínske centrum SAV Ličková Martina 1975 SAVBIOMED ; SAVVIR - Biomedicínske centrum SAV SCOPUS Lukáčiková Ľubomíra 1984 SAVBIOMED ; SAVVIR - Biomedicínske centrum SAV Belák Andrej 1979- SAVETNOL - Ústav etnológie a sociálnej antropológie SAV SCOPUS RID ORCID Roussier Lucia Kostičová Michaela Líšková A. Maďarová L. Štefkovičová Mária Reizigová Lenka Nováková Elena Sabaka P. Koščálová Alena Brejová Broňa Staroňová Edita Mišík Matej Vinař Tomáš Nosek Jozef Čekan Pavol Klempa Boris 1976 SAVBIOMED ; SAVVIR - Biomedicínske centrum SAV SCOPUS ORCID Source document Scientific Reports. Vol. 11, no. 1 (2021), art. no. 20494 Language eng - English Country GB - Great Britian Note open access URL URL link Document kind rozpis článkov z periodík (rbx) Citations ZHU, Y.S. - ZHANG, M. - JIE, Z.J. - TAO, S.C. Nucleic acid testing of SARS-CoV-2: A review of current methods, challenges, and prospects. In FRONTIERS IN MICROBIOLOGY. DEC 9 2022, vol. 13. Dostupné na: https://doi.org/10.3389/fmicb.2022.1074289. LI, J.G. - GAO, Z.F. - CHEN, J. - CHENG, R.L. - NIU, J.H. - ZHANG, J.L. - YANG, Y. - YUAN, X.M. - XIA, J. - MAO, G.L. - LIU, H.L. - DONG, Y.K. - WU, C.X. Development of a panel of three multiplex allele-specific qRT-PCR assays for quick differentiation of recombinant variants and Omicron subvariants of SARS-CoV-2. In FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY. ISSN 2235-2988, AUG 18 2022, vol. 12. Dostupné na: https://doi.org/10.3389/fcimb.2022.953027. SILVA, C.S. - TRYNDYAK, V.P. - CAMACHO, L. - ORLOFF, M.S. - PORTER, A. - GARNER, K. - MULLIS, L. - AZEVEDO, M. Temporal dynamics of SARS-CoV-2 genome and detection of variants of concern in wastewater influent from two metropolitan areas in Arkansas. In SCIENCE OF THE TOTAL ENVIRONMENT. ISSN 0048-9697, NOV 25 2022, vol. 849. Dostupné na: https://doi.org/10.1016/j.scitotenv.2022.157546. MORAWIEC, E. - MIKLASINSKA-MAJDANIK, M. - BRATOSIEWICZ-WASIK, J. - WOJTYCZKA, R.D. - SWOLANA, D. - STOLAREK, I. - CZERWINSKI, M. - SKUBIS-SIKORA, A. - SAMUL, M. - POLAK, A. - KRUSZNIEWSKA-RAJS, C. - PUDELKO, A. - FIGLEROWICZ, M. - BEDNARSKA-CZERWINSKA, A. - WASIK, T.J. From Alpha to Delta-Genetic Epidemiology of SARS-CoV-2 (hCoV-19) in Southern Poland. In PATHOGENS. JUL 2022, vol. 11, no. 7. Dostupné na: https://doi.org/10.3390/pathogens11070780. LAI, E. - KENNEDY, E.B. - LOZACH, J. - HAYASHIBARA, K. - DAVIS-TURAK, J. - BECKER, D. - BRZOSKA, P. - CASSENS, T. - DIAMOND, E. - GANDHI, M. - GRENINGER, A.L. - HAJIAN, P. - LEONETTI, N.A. - NGUYEN, J.M. - O'DONOVAN, K.M.C. - PECK, T. - RAMIREZ, J.M. - ROYCHOUDHURY, P. - SANDOVAL, E. - WESSELMAN, C. - WESSELMAN, T. - WHITE, S. - WILLIAMS, S. - WONG, D. - YU, Y.F. - CREAGER, R.S. A Method for Variant Agnostic Detection of SARS-CoV-2, Rapid Monitoring of Circulating Variants, and Early Detection of Emergent Variants Such as Omicron. In JOURNAL OF CLINICAL MICROBIOLOGY. ISSN 0095-1137, JUL 20 2022, vol. 60, no. 7. Dostupné na: https://doi.org/10.1128/jcm.00342-22. DAS, S. - FRANK, K.M. Strategies for Scaling up SARS-CoV-2 Molecular Testing Capacity. In CLINICS IN LABORATORY MEDICINE. ISSN 0272-2712, JUN 2022, vol. 42, no. 2, SI, p. 261-282. Dostupné na: https://doi.org/10.1016/j.cll.2022.02.006. YEUNG, P.S.W. - WANG, H.N. - SIBAI, M. - SOLIS, D. - YAMAMOTO, F. - IWAI, N. - JIANG, B. - HAMMOND, N. - TRUONG, B. - BIHON, S. - SANTOS, S. - MAR, M. - MAI, C. - MFUH, K.O. - MILLER, J.A. - HUANG, C.H. - SAHOO, M.K. - ZEHNDER, J.L. - PINSKY, B.A. Evaluation of a Rapid and Accessible Reverse Transcription-Quantitative PCR Approach for SARS-CoV-2 Variant of Concern Identification. In JOURNAL OF CLINICAL MICROBIOLOGY. ISSN 0095-1137, MAY 18 2022, vol. 60, no. 5. Dostupné na: https://doi.org/10.1128/jcm.00178-22. NORZ, D. - GRUNWALD, M. - TANG, H.T. - WEINSCHENK, C. - GUNTHER, T. - ROBITAILLE, A. - GIERSCH, K. - FISCHER, N. - GRUNDHOFF, A. - AEPFELBACHER, M. - PFEFFERLE, S. - LUTGEHETMANN, M. Clinical Evaluation of a Fully-Automated High-Throughput Multiplex Screening-Assay to Detect and Differentiate the SARS-CoV-2 B.1.1.529 (Omicron) and B.1.617.2 (Delta) Lineage Variants. In VIRUSES-BASEL. MAR 2022, vol. 14, no. 3. Dostupné na: https://doi.org/10.3390/v14030608. HOSCH, S. - MPINA, M. - NYAKURUNGU, E. - BORICO, N.S. - OBAMA, T.M.A. - OVONA, M.C. - WAGNER, P. - RUBIN, S.E. - VICKOS, U. - MILANG, D.V.N. - AYEKABA, M.O. - PHIRI, W.P. - DAUBENBERGER, C.A. - SCHINDLER, T. Genomic Surveillance Enables the Identification of Co-infections With Multiple SARS-CoV-2 Lineages in Equatorial Guinea. In FRONTIERS IN PUBLIC HEALTH. JAN 4 2022, vol. 9. Dostupné na: https://doi.org/10.3389/fpubh.2021.818401. GASPAREK, Miroslav - HANTABAL, Jakub. De novo synthesis of synthetic biology ecosystem in Slovakia: Challenges and opportunities. In Biotechnology Notes, 2022-01-01, 3, pp. 45-49. Dostupné na: https://doi.org/10.1016/j.biotno.2022.06.001. FARKAS, Kata - PELLETT, Cameron - WILLIAMS, Rachel - ALEX-SANDERS, Natasha - BASSANO, Irene - BROWN, Mathew R. - DENISE, Hubert - GRIMSLEY, Jasmine M. S. - KEVILL, Jessica L. - KHALIFA, Mohammad S. - PANTEA, Igor - STORY, Rich - WADE, Matthew J. - WOODHALL, Nick - JONES, Davey L. Rapid Assessment of SARS-CoV-2 Variant-Associated Mutations in Wastewater Using Real-Time RT-PCR. In MICROBIOLOGY SPECTRUM, 2023, vol. 11, no. 1, pp. ISSN 2165-0497. Dostupné na: https://doi.org/10.1128/spectrum.03177-22. Category ADCA - Scientific papers in foreign journals registered in Current Contents Connect with IF (impacted) Category of document (from 2022) V3 - Vedecký výstup publikačnej činnosti z časopisu Type of document článok Year 2021 Registered in WOS Registered in SCOPUS Registered in CCC DOI 10.1038/s41598-021-99661-7 
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File name Access Size Downloaded Type License Surveillance of SARS-CoV-2 lineage B.1.1.7 in Slovakia using a novel, multiplexed RT-qPCR assay.pdf available 2.4 MB 9 Publisher's version rok CC IF IF Q (best) JCR Av Jour IF Perc SJR SJR Q (best) CiteScore A rok vydania rok metriky IF IF Q (best) SJR SJR Q (best) 2021 2020 4.380 Q1 1.240 Q1
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