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Histones in Crenarchaea
Title Histones in Crenarchaea Author Čuboňová Ľubomíra SAVBIOGE - Ústav biochémie a genetiky živočíchov SAV Co-authors Sandman Kathleen Hallam Steven J. DeLong Edward F. Reeve John N. Source document Journal of Bacteriology. Vol. 187, no. 15 (2005), p. 5482–5485 Language eng - English Country US - United States of America Document kind rozpis článkov z periodík (rbx) Citations ELKINS, J. G. - PODAR, M. - GRAHAM, D. E. - MAKAROVA, K. S. - WOLF, Y. - RANDAU, L. - HEDLUND, B. P. - BROCHIER-ARMANET, C. - KUNIN, V. - ANDERSON, I. - LAPIDUS, A. - GOLTSMAN, E. - BARRY, K. - KOONIN, E. V. - HUGENHOLTZ, P. - KYRPIDES, N. - WANNER, G. - RICHARDSON, P. - KELLER, M. - STETTER, K. O. A korarchaeal genome reveals insights into the evolution of the Archaea. In PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. ISSN 0027-8424, 2008, vol. 105, no. 23, p. 8102-8107. GUO, L. - FENG, Y. G. - ZHANG, Z. F. - YAO, H. W. - LUO, Y. M. - WANG, J. F. - HUANG, L. Biochemical and structural characterization of Cren7, a novel chromatin protein conserved among Crenarchaea. In NUCLEIC ACIDS RESEARCH. ISSN 0305-1048, 2008, vol. 36, no. 4, p. 1129-1137. BROCHIER-ARMANET, C. - BOUSSAU, B. - GRIBALDO, S. - FORTERRE, P. Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota. In NATURE REVIEWS MICROBIOLOGY. ISSN 1740-1526, 2008, vol. 6, no. 3, p. 245-252. LEITÃO, E. - MORADAS-FERREIRA, P. - DE MARCO, P. Evidence of methanesulfonate utilizers in the Sargasso Sea metagenome. In Journal of Basic Microbiology, 2009, vol. 49, no. suppl. 1, s. 24-S30. HASELTINE, C. A. - KOWALCZYKOWSKI, S.C. An archaeal Rad54 protein remodels DNA and stimulates DNA strand exchange by RadA. In Nucleic Acids Research, 2009, vol. 37, no. 8, p. 2757-2770. POOLE, Anthony M. - PENNY, David. Evaluating hypotheses for the origin of eukaryotes. In BIOESSAYS, 2007, vol. 29, no. 1, p. 74-84. LUO, Xiao - SCHWARZ-LINEK, Uli - BOTTING, Catherine H. - HENSEL, Reinhard - SIEBERS, Bettina - WHITE, Malcolm F. CC1, a novel crenarchaeal DNA binding protein. In JOURNAL OF BACTERIOLOGY, 2007, vol. 189, no. 2, p. 403-409. CAVALIER-SMITH, Thomas. Rooting the tree of life by transition analyses. In BIOLOGY DIRECT, 2006, vol. 1, no. ROBERTSON, Charles E. Electron microscopy of Archaea. In CELLULAR ELECTRON MICROSCOPY, 2007, vol. 79, no., p. 169-191. NAVARRE, William Wiley - MCCLELLAND, Michael - LIBBY, Stephen J. - FANG, Ferric C. Silencing of xenogeneic DNA by H-NS facilitation of lateral gene transfer in bacteria by a defense system that recognizes foreign DNA. In GENES & DEVELOPMENT, 2007, vol. 21, no. 12, p. 1456-1471. EIRIN-LOPEZ, Jose M. - GONZALEZ-ROMERO, Rodrigo - DRYHURST, Deanna - MENDEZ, Josefina - AUSIO, Juan. Long-Term Evolution of Histone Families: Old Notions and New Insights into Their Mechanisms of Diversification Across Eukaryotes. In EVOLUTIONARY BIOLOGY: CONCEPT, MODELING, AND APPLICATION, 2009, vol., no., p. 139-162. JELINSKA, Clare - PETROVIC-STOJANOVSKA, Biljana - INGLEDEW, W. John - WHITE, Malcolm F. Dimer-dimer stacking interactions are important for nucleic acid binding by the archaeal chromatin protein Alba. In BIOCHEMICAL JOURNAL, 2010, vol. 427, no., p. 49-55. PROHASKA, Sonja J. - STADLER, Peter F. - KRAKAUER, David C. Innovation in gene regulation: The case of chromatin computation. In JOURNAL OF THEORETICAL BIOLOGY, 2010, vol. 265, no. 1, p. 27-44. SPANG, Anja - HATZENPICHLER, Roland - BROCHIER-ARMANET, Celine - RATTEI, Thomas - TISCHLER, Patrick - SPIECK, Eva - STREIT, Wolfgang - STAHL, David A. - WAGNER, Michael - SCHLEPER, Christa. Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota. In TRENDS IN MICROBIOLOGY, 2010, vol. 18, no. 8, p. 331-340. GRIBALDO, Simonetta - POOLE, Anthony M. - DAUBIN, Vincent - FORTERRE, Patrick - BROCHIER-ARMANET, Celine. The origin of eukaryotes and their relationship with the Archaea: are we at a phylogenomic impasse? In NATURE REVIEWS MICROBIOLOGY, 2010, vol. 8, no. 10, p. 743-752. POSTBERG, Jan - FORCOB, Sakeh - CHANG, Wei-Jen - LIPPS, Hans J. The evolutionary history of histone H3 suggests a deep eukaryotic root of chromatin modifying mechanisms. In BMC EVOLUTIONARY BIOLOGY, 2010, vol. 10, no. KNAEVELSRUD, Ingeborg - MOEN, Marivi N. - GROSVIK, Kristin - HAUGLAND, Gyri T. - BIRKELAND, Nils-Kare - KLUNGLAND, Arne - LEIROS, Ingar - BJELLAND, Svein. The Hyperthermophilic Euryarchaeon Archaeoglobus fulgidus Repairs Uracil by Single-Nucleotide Replacement. In JOURNAL OF BACTERIOLOGY, 2010, vol. 192, no. 21, p. 5755-5766. FORTERRE, Patrick. A new fusion hypothesis for the origin of Eukarya: better than previous ones, but probably also wrong. In RESEARCH IN MICROBIOLOGY, 2011, vol. 162, no. 1, p. 77-91. THOMAS, Vincent - BERTELLI, Claire - COLLYN, Francois - CASSON, Nicola - TELENTI, Amalio - GOESMANN, Alexander - CROXATTO, Antony - GREUB, Gilbert. Lausannevirus, a giant amoebal virus encoding histone doublets. In ENVIRONMENTAL MICROBIOLOGY, 2011, vol. 13, no. 6, p. 1454-1466. CEBALLOS, Shannon J. - HEYER, Wolf-Dietrich. Functions of the Snf2/Swi2 family Rad54 motor protein in homologous recombination. In BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS, 2011, vol. 1809, no. 9, p. 509-523. BARRY, Elizabeth R. - BELL, Stephen D. DNA replication in the archaea. In MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS, 2006, vol. 70, no. 4, p. 876. CAVALIER-SMITH, Thomas. Cell evolution and Earth history: stasis and revolution. In PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2006, vol. 361, no. 1470, p. 969. ARAVIND, L. - IYER, Lakshminarayan M. - KOONIN, Eugene V. Comparative genomics and structural biology of the molecular innovations of eukaryotes. In CURRENT OPINION IN STRUCTURAL BIOLOGY, 2006, vol. 16, no. 3, p. 409. KLETZIN, Arnulf - CAVICCHIOLI, R. General Characteristics and Important Model Organisms. In ARCHAEA: MOLECULAR AND CELLULAR BIOLOGY, 2007, vol., no., p. 14. HALLAM, Steven J. - KONSTANTINIDIS, Konstantinos T. - PUTNAM, Nik - SCHLEPER, Christa - WATANABE, Yoh-ichi - SUGAHARA, Junichi - PRESTON, Christina - DE LA TORRE, Jose - RICHARDSON, Paul M. - DELONG, Edward F. Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum. In PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, vol. 103, no. 48, p. 18296. GRIBALDO, S. - BROCHIER-ARMANET, C. The origin and evolution of Archaea: a state of the art. In PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2006, vol. 361, no. 1470, p. 1007. LANG, B. Franz - BURGER, Gertraud - MARECHALDROUARD, L. Mitochondrial and Eukaryotic Origins: A Critical Review. In MITOCHONDRIAL GENOME EVOLUTION, 2012, vol. 63, no., p. 1. ROBERTSON, C. E. - HARRIS, J. K. - SPEAR - PACE, N. R. Phylogenetic diversity and ecology of environmental Archaea. In CURRENT OPINION IN MICROBIOLOGY, 2005, vol. 8, no. 6, p. 638. FORTERRE, Patrick - ZIVANOVIC, Yvan - GRIBALDO, Simonetta - CAVICCHIOLI, R. Structure and Evolution of Genomes. In ARCHAEA: MOLECULAR AND CELLULAR BIOLOGY, 2007, vol., no., p. 411. MARTIN, W. Archaebacteria (Archaea) and the origin of the eukaryotic nucleus. In CURRENT OPINION IN MICROBIOLOGY, 2005, vol. 8, no. 6, p. 630. EIRIN-LOPEZ, J. M. - FREHLICK, L. J. - AUSIO, J. Protamines, in the footsteps of linker histone evolution. In JOURNAL OF BIOLOGICAL CHEMISTRY, 2006, vol. 281, no. 1, p. 1. POOLE, Anthony M. Did group II intron proliferation in an endosymbiont-bearing archaeon create eukaryotes? In BIOLOGY DIRECT, 2006, vol. 1, no. ZHANG ZHENFENG - GUO L. I. - HUANG L. I. Archaeal chromatin proteins. In SCIENCE CHINA-LIFE SCIENCES, 2012, vol. 55, no..5, p. 377. NALABOTHULA, Narasimharao - XI, Liqun - BHATTACHARYYA, Sucharita - WIDOM, Jonathan - WANG, Ji-Ping - REEVE, John N. - SANTANGELO, Thomas J. - FONDUFE-MITTENDORF, Yvonne N. Archaeal nucleosome positioning in vivo and in vitro is directed by primary sequence motifs. In BMC GENOMICS. ISSN 1471-2164, 2013, vol. 14, no., p. DRIESSEN, Rosalie P. C. - MENG, He - SURESH, Gorle - SHAHAPURE, Rajesh - LANZANI, Giovanni - PRIYAKUMAR, U. Deva - WHITE, Malcolm F. - SCHIESSEL, Helmut - VAN NOORT, John - DAME, Remus Th. Crenarchaeal chromatin proteins Cren7 and Sul7 compact DNA by inducing rigid bends. In NUCLEIC ACIDS RESEARCH. ISSN 0305-1048, 2013, vol. 41, no. 1, p. 196. CAVALIER-SMITH, Thomas. The Neomuran Revolution and Phagotrophic Origin of Eukaryotes and Cilia in the Light of Intracellular Coevolution and a Revised Tree of Life. In COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY. ISSN 1943-0264, 2014, vol. 6, no. 9, p. ZHANG, Zhenfeng - GONG, Yong - CHEN, Yuanyuan - LI, Hongbin - HUANG, Li. Insights into the interaction between Cren7 and DNA: the role of loop beta 3-beta 4. In EXTREMOPHILES. ISSN 1431-0651, 2015, vol. 19, no. 2, p. 395. GOYAL, Manish - BANERJEE, Chinmoy - NAG, Shiladitya - BANDYOPADHYAY, Uday. The Alba protein family: Structure and function. In BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS. ISSN 1570-9639, 2016, vol. 1864, no. 5, pp. 570-583. MINAROVITS, Janos - BANATI, Ferenc - SZENTHE, Kalman - NILLER, Hans Helmut. Epigenetic Regulation. In PATHO-EPIGENETICS OF INFECTIOUS DISEASE. ISSN 0065-2598, 2016, vol. 879, no., pp. 1-25. NISHIDA, Hiromi - OSHIMA, Taku. Archaeal histone distribution is associated with archaeal genome base composition. In JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY. ISSN 0022-1260, 2017, vol. 63, no. 1, pp. 28-35. ZACHAR, Istvan - SZATHMARY, Eors. Breath-giving cooperation: critical review of origin of mitochondria hypotheses Major unanswered questions point to the importance of early ecology. In BIOLOGY DIRECT. ISSN 1745-6150, 2017, vol. 12, no., pp. ZHANG, Zhenfeng - ZHAO, Mohan - WANG, Li - CHEN, Yuanyuan - DONG, Yuhui - GONG, Yong - HUANG, Li. Roles of Leu28 side chain intercalation in the interaction between Cren7 and DNA. In BIOCHEMICAL JOURNAL. ISSN 0264-6021, 2017, vol. 474, no. 10, pp. 1727-1739. BOYLE, Richard. Eukaryotic origins and the Proterozoic Earth system: A link between global scale glaciations and eukaryogenesis? In EARTH-SCIENCE REVIEWS. ISSN 0012-8252, 2017, vol. 174, no., pp. 22-38. JOHNSON, Tyler - PAYNE, Sophie - GROVE, Ryan - MCCARTHY, Samuel - OELTJEN, Erin - MACH, Collin - ADAMEC, Jiri - WILSON, Mark A. - VAN COTT, Kevin - BLUM, Paul. Methylation deficiency of chromatin proteins is a non-mutational and epigenetic-like trait in evolved lines of the archaeon Sulfolobus solfataricus. In JOURNAL OF BIOLOGICAL CHEMISTRY. ISSN 0021-9258, 2019, vol. 294, no. 19, pp. 7821-7832. SANDERS, Travis J. - MARSHALL, Craig J. - SANTANGELO, Thomas J. The Role of Archaeal Chromatin in Transcription. In JOURNAL OF MOLECULAR BIOLOGY. ISSN 0022-2836, 2019, vol. 431, no. 20, pp. 4103-4115. BRUNK, Clifford F. - MARTIN, William F. Archaeal Histone Contributions to the Origin of Eukaryotes. In TRENDS IN MICROBIOLOGY. ISSN 0966-842X, 2019, vol. 27, no. 8, pp. 703-714. SANTORO, A. E. - KELLOM, M. - LAPERRIERE, S. M. Contributions of single-cell genomics to our understanding of planktonic marine archaea. In PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES. ISSN 0962-8436, 2019, vol. 374, no. 1786, pp. BOZORGMEHR, Joseph Hannon. The origin of chromosomal histones in a 30S ribosomal protein. In GENE. ISSN 0378-1119, 2020, vol. 726, no., pp. BAKER, Brett J. - DE ANDA, Valerie - SEITZ, Kiley W. - DOMBROWSKI, Nina - SANTORO, Alyson E. - LLOYD, Karen G. Diversity, ecology and evolution of Archaea. In NATURE MICROBIOLOGY. ISSN 2058-5276, 2020, vol. 5, no. 7, pp. 887-900. SEABORG, David. Organisms amplify diversity: An autocatalytic hypothesis. In Organisms Amplify Diversity: An Autocatalytic Hypothesis, 2023-06-30, pp. 1-254. Dostupné na: https://doi.org/10.1201/9781003246640. Category ADCA - Scientific papers in foreign journals registered in Current Contents Connect with IF (impacted) Category of document (from 2022) V3 - Vedecký výstup publikačnej činnosti z časopisu Type of document článok Year 2005 Registered in WOS Registered in CCC DOI 10.1128/JB.187.15.5482-5485.2005 
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rok CC IF IF Q (best) JCR Av Jour IF Perc SJR SJR Q (best) CiteScore A rok vydania rok metriky IF IF Q (best) SJR SJR Q (best) 2005 2004 4.146
Number of the records: 1