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Northern glacial refugia and altitudinal niche divergence shape genome-wide differentiation in the emerging plant model Arabidopsis arenosa
Title Northern glacial refugia and altitudinal niche divergence shape genome-wide differentiation in the emerging plant model Arabidopsis arenosa Author Kolář Filip Co-authors Fuxová Gabriela Záveská Eliška Nagano Atsushi J. Hyklová Lucie Lučanová Magdalena Kudoh Hiroshi Marhold Karol 1959- SAVBOTAN - Botanický ústav SAV RID ORCID Source document Molecular Ecology. Vol. 25, no. 16 (2016), p. 3929-3949 Language eng - English Country GB - Great Britian Document kind rozpis článkov z periodík (rbx) Keywords approximate Bayesian computation * Arabidopsis * niche differentiation * phylogeography * RADseq Citations MRAZ, P. - RONIKIER, M. Biogeography of the Carpathians: evolutionary and spatial facets of biodiversity. In Biological Journal of the Linnean Society, 2016, vol. 119, no. 3, p. 528-559. ISSN 0024-4066. POSTOLACHE, D. - POPESCU, F. - PAULE, L. - BALLIAN, D. - ZHELEV, P. - FARCAS, S. - PAULE, J. - BADEA, O. Unique postglacial evolution of the hornbeam (Carpinus betulus L.) in the Carpathians and the Balkan Peninsula revealed by chloroplast DNA. In SCIENCE OF THE TOTAL ENVIRONMENT. ISSN 0048-9697, DEC 1 2017, vol. 599, p. 1493-1502. WIELSTRA, B. - ZIELINSKI, P. - BABIK, W. The Carpathians hosted extra-Mediterranean refugia-within-refugia during the Pleistocene Ice Age: genomic evidence from two newt genera. In BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY. ISSN 0024-4066, NOV 2017, vol. 122, no. 3, p. 605-613. VILLAVERDE, T. - GONZALEZ-MORENO, P. - RODRIGUEZ-SANCHEZ, F. - ESCUDERO, M. Niche shifts after long-distance dispersal events in bipolar sedges (Carex, Cyperaceae). In AMERICAN JOURNAL OF BOTANY. ISSN 0002-9122, NOV 2017, vol. 104, no. 11, p. 1765-1774. GREWE, F. - HUANG, J.P. - LEAVITT, S.D. - LUMBSCH, H.T. Reference-based RADseq resolves robust relationships among closely related species of lichen-forming fungi using metagenomic DNA. In SCIENTIFIC REPORTS. ISSN 2045-2322, AUG 29 2017, vol. 7. YANT, L. - BOMBLIES, K. Genomic studies of adaptive evolution in outcrossing Arabidopsis species. In CURRENT OPINION IN PLANT BIOLOGY. ISSN 1369-5266, APR 2017, vol. 36, p. 9-14. LAFON-PLACETTE, C. - JOHANNESSEN, I.M. - HORNSLIEN, K.S. - ALI, M.F. - BJERKAN, K.N. - BRAMSIEPE, J. - GLOCKLE, B.M. - REBERNIG, C.A. - BRYSTING, A.K. - GRINI, P.E. - KOHLER, C. Endosperm-based hybridization barriers explain the pattern of gene flow between Arabidopsis lyrata and Arabidopsis arenosa in Central Europe. In PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. ISSN 0027-8424, FEB 7 2017, vol. 114, no. 6, p. E1027-E1035. GUGGISBERG, Alessia - LIU, Xuanyu - SUTER, Leonie - MANSION, Guilhem - FISCHER, Martin C. - FIOR, Simone - ROUMET, Marie - KRETZSCHMAR, Ruben - KOCH, Marcus A. - WIDMER, Alex. The genomic basis of adaptation to calcareous and siliceous soils in Arabidopsis lyrata. In MOLECULAR ECOLOGY. 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ISSN 1471-2148, OCT 11 2018, vol. 18. BADUEL, Pierre - HUNTER, Ben - YEOLA, Sarang - BOMBLIES, Kirsten. Genetic basis and evolution of rapid cycling in railway populations of tetraploid Arabidopsis arenosa. In PLOS GENETICS. ISSN 1553-7404, JUL 2018, vol. 14, no. 7. MEIRMANS, Patrick G. - LIU, Shenglin - VAN TIENDEREN, Peter H. The Analysis of Polyploid Genetic Data. In JOURNAL OF HEREDITY. ISSN 0022-1503, MAY 2018, vol. 109, no. 3, p. 283-296. ORTEGO, Joaquin - GUGGER, Paul F. - SORK, Victoria L. Genomic data reveal cryptic lineage diversification and introgression in Californian golden cup oaks (section Protobalanus). In NEW PHYTOLOGIST. ISSN 0028-646X, APR 2018, vol. 218, no. 2, p. 804-818. JARCUSKA, Benjamin - KANUCH, Peter - NADO, Ladislav - KRISTIN, Anton. Quantitative biogeography of Orthoptera does not support classical qualitative regionalization of the Carpathian Mountains. In BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY. ISSN 0024-4066, DEC 2019, vol. 128, no. 4, p. 887-900. MARBURGER, Sarah - MONNAHAN, Patrick - SEEAR, Paul J. - MARTIN, Simon H. - KOCH, Jordan - PAAJANEN, Pirita - BOHUTINSKA, Magdalena - HIGGINS, James D. - SCHMICKL, Roswitha - YANT, Levi. Interspecific introgression mediates adaptation to whole genome duplication. In NATURE COMMUNICATIONS. ISSN 2041-1723, NOV 18 2019, vol. 10. NEMECKOVA, Hana - KRAK, Karol - CHRTEK, Jindrich, Jr. Complex pattern of ploidal and genetic variation in Seseli libanotis (Apiaceae). In ANNALES BOTANICI FENNICI. ISSN 0003-3847, FEB 2019, vol. 56, no. 1-3, p. 57-77. PACHSCHWOELL, Clemens - PACHSCHWOELL, Tetiana. A new find of Arabidopsis neglecta (Brassicaceae) in the Svydovets Massif (Ukrainian Carpathians). In Ukrayins'kyi Botanichnyi Zhurnal. ISSN 0372-4123, 2019, vol. 76, no. 1, p. 60-66. KOCH, Marcus A. The plant model system Arabidopsis set in an evolutionary systematic, and spatio-temporal context. In JOURNAL OF EXPERIMENTAL BOTANY. ISSN 0022-0957, JAN 1 2019, vol. 70, no. 1, p. 55-67. FRANCHESCO MOLINA-HENAO, Y. - HOPKINS, Robin. Autopolyploid lineage shows climatic niche expansion but not divergence in Arabidopsis arenosa. In AMERICAN JOURNAL OF BOTANY. ISSN 0002-9122, JAN 2019, vol. 106, no. 1, p. 61-70. VAID, Neha - LAITINEN, Roosa A. E. Diverse paths to hybrid incompatibility in Arabidopsis. In PLANT JOURNAL. ISSN 0960-7412, JAN 2019, vol. 97, no. 1, SI, p. 199-213. BREMAN, Elinor - HURDU, Bogdan-Iuliu - KLIMENT, Jan - KOBIV, Yuriy - KUCERA, Jaromir - MRAZ, Patrik - PUSCAS, Mihai - RENAUD, Julien - RONIKIER, Michal - SIBIK, Jozef - SCHMOTZER, Andras - STUBNOVA, Eligka - SZATMARI, Paul-Marian - TASENKEVICH, Lydia - TURIS, Peter - SLOVAK, Marek. Conserving the endemic flora of the Carpathian Region: an international project to increase and share knowledge of the distribution, evolution and taxonomy of Carpathian endemics and to conserve endangered species. In PLANT SYSTEMATICS AND EVOLUTION. ISSN 0378-2697, MAY 14 2020, vol. 306, no. 3, art. no. 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Dostupné na: https://doi.org/10.1093/molbev/msab096. BOHUTíNSKá, M. - HANDRICK, V. - YANT, L. - SCHMICKL, R. - KOLáR, F. - BOMBLIES, K. - PAAJANEN, P. De Novo Mutation and Rapid Protein (Co-)evolution during Meiotic Adaptation in iArabidopsis arenosa/i. In MOLECULAR BIOLOGY AND EVOLUTION. ISSN 0737-4038, MAY 2021, vol. 38, no. 5, p. 1980-1994. Dostupné na: https://doi.org/10.1093/molbev/msab001. Category ADCA - Scientific papers in foreign journals registered in Current Contents Connect with IF (impacted) Category of document (from 2022) V3 - Vedecký výstup publikačnej činnosti z časopisu Type of document článok Year 2016 Registered in WOS Registered in SCOPUS Registered in CCC DOI 10.1111/mec.13721 
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File name Access Size Downloaded Type License Northern glacial refugia and altitudinal niche divergence shape genome-wide differentiation in the emerging plant model Arabidopsis arenosa.pdf Neprístupný/archív 9.8 MB 1 Publisher's version rok CC IF IF Q (best) JCR Av Jour IF Perc SJR SJR Q (best) CiteScore A rok vydania rok metriky IF IF Q (best) SJR SJR Q (best) 2016 2015 5.947 Q1 3.879 Q1
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