Počet záznamov: 1  

Structural and evolutionary aspects of two families of non-catalytic domains present in starch and glycogen binding proteins from microbes, plants and animals

  1. NázovStructural and evolutionary aspects of two families of non-catalytic domains present in starch and glycogen binding proteins from microbes, plants and animals
    Autor Janeček Štefan SAVMOBIO - Ústav molekulárnej biológie SAV    ORCID
    Spoluautori Svensson B.

    MacGregor E.A.

    Zdroj.dok. Enzyme and Microbial Technology. Vol. 49, (2011), p. 429-440
    Jazyk dok.eng - angličtina
    Druh dok.rozpis článkov z periodík (rbx)
    OhlasyNISHA, M. - SATYANARAYANA, T. In BIOENGINEERED. NOV-DEC 2013, vol. 4, no. 6, p. 388-400.
    CENCI, U. - CHABI, M. - DUCATEZ, M. - TIRTIAUX, C. - NIRMAL-RAJ, J. - UTSUMI, Y. - KOBAYASHI, D. - SASAKI, S. - SUZUKI, E. - NAKAMURA, Y. - PUTAUX, J.L. - ROUSSEL, X. - DURAND-TERRASSON, A. - BHATTACHARYA, D. - VERCOUTTER-EDOUART, A.S. - MAES, E. - ARIAS, M.C. - PALCIC, M. - SIM, L. - BALL, S.G. - COLLEONI, C. In PLANT CELL. OCT 2013, vol. 25, no. 10, p. 3961-3975.
    MARTIN, M. - WAYLLACE, N.Z. - VALDEZ, H.A. - GOMEZ-CASATI, D.F. - BUSI, M.V. In BIOCHIMIE. OCT 2013, vol. 95, no. 10, p. 1865-1870.
    NG, I.S. - CHI, X.Q. - WU, X.M. - BAO, Z.W. - LU, Y.H. - CHANG, J.S. - LING, X.P. In BIOCHEMICAL ENGINEERING JOURNAL. SEP 15 2013, vol. 78, SI, p. 53-58.
    SANZ, P. - RUBIO, T. - GARCIA-GIMENO, M.A. In FEBS JOURNAL. AUG 2013, vol. 280, no. 16, p. 3723-3733.
    GOMEZ-CASATI, D.F. - MARTIN, M. - BUSI, M.V. In PROTEIN AND PEPTIDE LETTERS. AUG 2013, vol. 20, no. 8, p. 856-863.
    NISHA, M. - SATYANARAYANA, T. In APPLIED MICROBIOLOGY AND BIOTECHNOLOGY. JUL 2013, vol. 97, no. 14, p. 6279-6292.
    RAMON, M. - RUELENS, P. - LI, Y. - SHEEN, J. - GEUTEN, K. - ROLLAND, F. In PLANT JOURNAL. JUL 2013, vol. 75, no. 1, p. 11-25.
    RAO, T.J.M. - GOYAL, A. In PREPARATIVE BIOCHEMISTRY & BIOTECHNOLOGY. MAR 11 2013, vol. 43, no. 4, p. 329-341.
    ORZECHOWSKI, S. - GRABOWSKA, A. - SITNICKA, D. - SIMINSKA, J. - FELUS, M. - DUDKIEWICZ, M. - FUDALI, S. - SOBCZAK, M. In ACTA PHYSIOLOGIAE PLANTARUM. FEB 2013, vol. 35, no. 2, p. 483-500.
    LEEMHUIS, H. - PIJNING, T. - DOBRUCHOWSKA, J.M. - VAN LEEUWEN, S.S. - KRALJ, S. - DIJKSTRA, B.W. - DIJKHUIZEN, L. In JOURNAL OF BIOTECHNOLOGY. JAN 20 2013, vol. 163, no. 2, p. 250-272.
    GENTRY, M.S. - ROMA-MATEO, C. - SANZ, P. In FEBS JOURNAL. JAN 2013, vol. 280, no. 2, SI, p. 525-537.
    ABBOTT, D.W. - VAN BUEREN, A.L. In CURRENT OPINION IN STRUCTURAL BIOLOGY. OCT 2014, vol. 28, p. 32-40.
    MEEKINS, D.A. - RATHTHAGALA, M. - HUSODO, S. - WHITE, C.J. - GUO, H.F. - KOTTING, O. - VANDER KOOI, C.W. - GENTRY, M.S. In PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. MAY 20 2014, vol. 111, no. 20, p. 7272-7277.
    AVILA-CASTANEDA, A. - GUTIERREZ-GRANADOS, N. - RUIZ-GAYOSSO, A. - SOSA-PEINADO, A. - MARTINEZ-BARAJAS, E. - COELLO, P. In FRONTIERS IN PLANT SCIENCE. MAY 16 2014, vol. 5.
    TAMAMURA, N. - SABURI, W. - MUKAI, A. - MORIMOTO, N. - TAKEHANA, T. - KOIKE, S. - MATSUI, H. - MORI, H. In BIOCHEMICAL ENGINEERING JOURNAL. MAY 15 2014, vol. 86, p. 8-15.
    BREWER, M.K. - HUSODO, S. - DUKHANDE, V.V. - JOHNSON, M.B. - GENTRY, M.S. In BMC BIOCHEMISTRY. APR 2 2014, vol. 15.
    PENG, H. - ZHENG, Y.Y. - CHEN, M.J. - WANG, Y. - XIAO, Y.Z. - GAO, Y. In FEBS LETTERS. APR 2 2014, vol. 588, no. 7, p. 1161-1167.
    PENG, C. - WANG, Y.H. - LIU, F. - REN, Y.L. - ZHOU, K.N. - LV, J. - ZHENG, M. - ZHAO, S.L. - ZHANG, L. - WANG, C.M. - JIANG, L. - ZHANG, X. - GUO, X.P. - BAO, Y.Q. - WAN, J.M. In PLANT JOURNAL. MAR 2014, vol. 77, no. 6, p. 917-930.
    ZHU, Y.Q. - ZHANG, M. - KELLY, A.R. - CHENG, A. In BIOSCIENCE REPORTS. 2014, vol. 34, 4, p. 311-320.
    SEUNG, D. - SOYK, S. - COIRO, M. - MAIER, B.A. - EICKE, S. - ZEEMAN, S.C. In PLOS BIOLOGY. FEB 2015, vol. 13, no. 2.
    OH, I.N. - JANE, J.L. - WANG, K. - PARK, J.T. - PARK, K.H. In EXTREMOPHILES. MAR 2015, vol. 19, no. 2, p. 363-371.
    CARVALHO, C.C. - PHAN, N.N. - CHEN, Y.F. - REILLY, P.J. In BIOPOLYMERS. APR 2015, vol. 103, no. 4, p. 203-214.
    NISHA, M. - SATYANARAYANA, T. In INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES. MAY 2015, vol. 76, p. 279-291.
    OLIGSCHLAEGER, Y. - MIGLIANICO, M. - CHANDA, D. - SCHOLZ, R. - THALI, R.F. - TUERK, R. - STAPLETON, D.I. - GOOLEY, P.R. - NEUMANN, D. In JOURNAL OF BIOLOGICAL CHEMISTRY. MAY 1 2015, vol. 290, no. 18, p. 11715-11728.
    CHANG, T.C. - STERGIOPOULOS, I. In FEBS JOURNAL. MAY 2015, vol. 282, no. 10, p. 2014-2028.
    SCHMID, J. - SIEBER, V. - REHM, B. In FRONTIERS IN MICROBIOLOGY. MAY 26 2015, vol. 6.
    NISHA, M. - SATYANARAYANA, T. In APPLIED MICROBIOLOGY AND BIOTECHNOLOGY. JUL 2015, vol. 99, no. 13, p. 5461-5474.
    FROESE, D.S. - MICHAELI, A. - MCCORVIE, T.J. - KROJER, T. - SASI, M. - MELAEV, E. - GOLDBLUM, A. - ZATSEPIN, M. - LOSSOS, A. - ALVAREZ, R. - ESCRIBA, P.V. - MINASSIAN, B.A. - VON DELFT, F. - KAKHLON, O. - YUE, W.W. In HUMAN MOLECULAR GENETICS. OCT 15 2015, vol. 24, no. 20, p. 5667-5676.
    MANOHARAN, L. - KUSHWAHA, S.K. - HEDLUND, K. - AHREN, D. In DNA RESEARCH. DEC 2015, vol. 22, no. 6, p. 451-460.
    Nakamura, Y. 2015 Starch: Metabolism and Structure pp. 161-209
    ATTIGANI, A. - SUN, L.F. - WANG, Q. - LIU, Y.D. - BAI, D.P. - LI, S.P. - HUANG, X.H. In ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS. DEC 2016, vol. 72, 12, p. 870-876.
    KUNDU, S. - SHARMA, R. In FRONTIERS IN PLANT SCIENCE. AUG 12 2016, vol. 7.
    NEKIUNAITE, L. - ISAKSEN, T. - VAAJE-KOLSTAD, G. - ABOU HACHEM, M. In FEBS LETTERS. AUG 2016, vol. 590, no. 16, p. 2737-2747.
    MEEKINS, D.A. - KOOI, C.W.V. - GENTRY, M.S. In FEBS JOURNAL. JUL 2016, vol. 283, no. 13, p. 2427-2447.
    EMANUELLE, S. - BREWER, M.K. - MEEKINS, D.A. - GENTRY, M.S. In CELLULAR AND MOLECULAR LIFE SCIENCES. JUL 2016, vol. 73, no. 14, p. 2765-2778.
    VALK, V. - VAN BUEREN, A.L. - VAN DER KAAIJ, R.M. - DIJKHUIZEN, L. In FEBS JOURNAL. JUN 2016, vol. 283, no. 12, p. 2354-2368.
    LI, X.X. - YU, J.G. - ZHANG, J.H. - SUN, H.B. - ZHANG, X.C. In BIOMOLECULAR NMR ASSIGNMENTS. OCT 2017, vol. 11, no. 2, p. 235-237.
    SEUNG, D. - BOUDET, J. - MONROE, J. - SCHREIER, T.B. - DAVID, L.C. - ABT, M. - LU, K.J. - ZANELLA, M. - ZEEMANA, S.C. In PLANT CELL. JUL 2017, vol. 29, no. 7, p. 1657-+.
    WILKENS, C. - BUSK, P.K. - PILGAARD, B. - ZHANG, W.J. - NIELSEN, K.L. - NIELSEN, P.H. - LANGE, L. In BIOTECHNOLOGY FOR BIOFUELS. JUN 21 2017, vol. 10.
    JIA, X.B. - GUO, Y.H. - LIN, X.J. - YOU, M.S. - LIN, C.Q. - CHEN, L.J. - CHEN, J.C. In JOURNAL OF BASIC MICROBIOLOGY. JUN 2017, vol. 57, no. 6, p. 471-480.
    SANZ, P. - VIANA, R. - GARCIA-GIMENO, M.A. In AMP-ACTIVATED PROTEIN KINASE. 2016, vol. 107, p. 353-374.
    FRANDSEN, Kristian E.H. - POULSEN, Jens Christian Navarro - TOVBORG, Morten - JOHANSEN, Katja S. - LO LEGGIO, Leila. In Acta Crystallographica Section D: Structural Biology, 2017-01-01, 73, 1, pp. 64-76.
    NAKAMURA, Y. Rice starch biotechnology: Rice endosperm as a model of cereal endosperms. In STARCH-STARKE. JAN 2018, vol. 70, no. 1-2, SI.
    ZHANG, W. - YU, J.G. - ZHANG, X.C. - PENG, H. - LI, X.X. - ZHANG, J.H. - SUN, H.B. - TU, X.M. Ligand Induced Folding of the First Identified CBM69 Starch Binding Domain AmyP-SBD. In PROTEIN AND PEPTIDE LETTERS. 2018, vol. 25, no. 4, p. 362-367.
    ARREDONDO-SANTOYO, M. - VAZQUEZ-GARCIDUENAS, M.S. - VAZQUEZ-MARRUFO, G. Identification and Characterization of the Biotechnological Potential of a Wild Strain of Paraconiothyrium sp. In BIOTECHNOLOGY PROGRESS. JUL-AUG 2018, vol. 34, no. 4, p. 846-857.
    BEN IMEDDOURENE, A. - ESQUE, J. - ANDRE, I. Combining multi-scale modelling methods to decipher molecular motions of a branching sucrase from glycoside-hydrolase family 70. In PLOS ONE. AUG 1 2018, vol. 13, no. 8.
    GARCIA-GIMENO, M.A. - KNECHT, E. - SANZ, P. Lafora Disease: A Ubiquitination-Related Pathology. In CELLS. AUG 2018, vol. 7, no. 8.
    RUIZ-GAYOSSO, A. - RODRIGUEZ-SOTRES, R. - MARTINEZ-BARAJAS, E. - COELLO, P. A role for the carbohydrate-binding module (CBM) in regulatory SnRK1 subunits: the effect of maltose on SnRK1 activity. In PLANT JOURNAL. OCT 2018, vol. 96, no. 1, p. 163-175.
    CRAIG, P.M. - MOYES, C.D. - LEMOINE, C.M.R. Sensing and responding to energetic stress: Evolution of the AMPK network. In COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY. OCT 2018, vol. 224, SI, p. 156-169.
    KARIM, K.M.R. - HUSAINI, A. - SING, N.N. - TASNIM, T. - SINANG, F.M. - HUSSAIN, H. - HOSSAIN, M.A. - ROSLAN, H. Characterization and expression in Pichia pastoris of a raw starch degrading glucoamylase (GA2) derived from Aspergillus flavus NSH9. In PROTEIN EXPRESSION AND PURIFICATION. DEC 2019, vol. 164.
    ROTH, C. - MOROZ, O.V. - TURKENBURG, J.P. - BLAGOVA, E. - WATERMAN, J. - ARIZA, A. - MING, L. - SUN, T.Q. - ANDERSEN, C. - DAVIES, G.J. - WILSON, K.S. Structural and Functional Characterization of Three Novel Fungal Amylases with Enhanced Stability and pH Tolerance. In INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. OCT 2019, vol. 20, no. 19.
    KUNDU, S. Insights into the mechanism(s) of digestion of crystalline cellulose by plant class C GH9 endoglucanases. In JOURNAL OF MOLECULAR MODELING. AUG 2019, vol. 25, no. 8.
    FINDINIER, J. - LAURENT, S. - DUCHENE, T. - ROUSSEL, X. - LANCELON-PIN, C. - CUINE, S. - PUTAUX, J.L. - LI-BEISSON, Y. - D'HULST, C. - WATTEBLED, F. - DAUVILLEE, D. Deletion of BSG1 in Chlamydomonas reinhardtii leads to abnormal starch granule size and morphology. In SCIENTIFIC REPORTS. FEB 13 2019, vol. 9.
    SEUNG, D. - SMITH, A.M. Starch granule initiation and morphogenesis-progress in Arabidopsis and cereals. In JOURNAL OF EXPERIMENTAL BOTANY. JAN 30 2019, vol. 70, no. 3, p. 771-784.
    BREWER, M.K. - GENTRY, M.S. Brain Glycogen Structure and Its Associated Proteins: Past, Present and Future. In BRAIN GLYCOGEN METABOLISM. 2019, vol. 23, p. 17-81.
    CARRILLO, J.B. - TORRESI, F. - MORALES, L.L. - RICORDI, M. - GOMEZ-CASATI, D.F. - BUSI, M.V. - MARTIN, M. Identification and characterization of ChlreSEX4, a novel glucan phosphatase from Chlamydomonas reinhardtii green alga. In ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS. ISSN 0003-9861, FEB 15 2020, vol. 680, 108235
    TETLOW, I.J. - BERTOFT, E. A Review of Starch Biosynthesis in Relation to the Building Block-Backbone Model. In INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. OCT 2020, vol. 21, no. 19.
    LI, Q. - ZHANG, M. - WU, T. - LIU, R. Potential correlation between carbohydrate-active enzyme family 48 expressed by gut microbiota and the expression of intestinal epithelial AMP-activated protein kinase beta. In JOURNAL OF FOOD BIOCHEMISTRY. ISSN 0145-8884, FEB 2020, vol. 44, no. 2.
    WANG, W. - WEI, X.J. - JIAO, G.A. - CHEN, W.Q. - WU, Y.W. - SHENG, Z.H. - HU, S.K. - XIE, L.H. - WANG, J.Y. - TANG, S.Q. - HU, P.S. GBSS-BINDING PROTEIN, encoding a CBM48 domain-containing protein, affects rice quality and yield. In JOURNAL OF INTEGRATIVE PLANT BIOLOGY. ISSN 1672-9072, JUL 2020, vol. 62, no. 7, p. 948-966.
    HEDÍN, Nicolas - BARCHIESI, Julieta - GOMEZ-CASATI, Diego F. - BUSI, María V. Functional and structural characterization of a novel isoamylase from ostreococcus tauri and role of the n-terminal domain. In Open Biotechnology Journal, 2020-01-01, 14, 1, pp. 1-11.
    YU, J.W. - WANG, K.Y. - BECKLES, D.M. Starch branching enzymes as putative determinants of postharvest quality in horticultural crops. In BMC PLANT BIOLOGY. ISSN 1471-2229, OCT 21 2021, vol. 21, no. 1.
    COCKBURN, D.W. - KIBLER, R. - BROWN, H.A. - DUVALL, R. - MORAIS, S. - BAYER, E. - KOROPATKIN, N.M. Structure and substrate recognition by the Ruminococcus bromii amylosome pullulanases. In JOURNAL OF STRUCTURAL BIOLOGY. ISSN 1047-8477, SEP 2021, vol. 213, no. 3.
    DITTMER, K.E. - PRADHAN, P. - TOMPKINS, Q.C. - BRITTINGHAM, A. - WILSON, W.A. Cloning and characterization of glycogen branching and debranching enzymes from the parasitic protist Trichomonas vaginalis. In BIOCHIMIE. ISSN 0300-9084, JUL 2021, vol. 186, p. 59-72.
    KAMAT, S. Molecular Basis and Genetic Regulation of EPS. In MICROBIAL EXOPOLYSACCHARIDES AS NOVEL AND SIGNIFICANT BIOMATERIALS. ISSN 2364-1878, 2021, p. 45-83.
    DOBRANOWSKI, P.A. - STINTZI, A. Resistant starch, microbiome, and precision modulation. In GUT MICROBES. ISSN 1949-0976, JAN 1 2021, vol. 13, no. 1.
    ZHANG, L. - LI, N. - ZHANG, J. - ZHAO, L.L. - QIU, J.J. - WEI, C.X. The CBM48 domain-containing protein FLO6 regulates starch synthesis by interacting with SSIVb and GBSS in rice. In PLANT MOLECULAR BIOLOGY. ISSN 0167-4412, MAR 2022, vol. 108, no. 4-5, SI, p. 343-361. Dostupné na: https://doi.org/10.1007/s11103-021-01178-0.
    HEDIN, N. - VELAZQUEZ, M.B. - BARCHIESI, J. - GOMEZ-CASATI, D.F. - BUSI, M.V. CBM20CP, a novel functional protein of starch metabolism in green algae. In PLANT MOLECULAR BIOLOGY. ISSN 0167-4412, MAR 2022, vol. 108, no. 4-5, SI, p. 363-378. Dostupné na: https://doi.org/10.1007/s11103-021-01190-4.
    BAN, X.F. - XI, S.X. - JIANG, H.M. - GU, Z.B. - LI, C.M. - CHENG, L. - HONG, Y. - LI, Z.F. The amino acid on the top of the active groove allosterically modulates product specificity of the 1,4-α-glucan branching enzyme. In FOOD CHEMISTRY. ISSN 0308-8146, AUG 1 2022, vol. 384. Dostupné na: https://doi.org/10.1016/j.foodchem.2022.132458.
    CONCHOU, L. - MARTIN, J. - GONçALVES, I.R. - GALISSON, F. - VIOLOT, S. - GUILLIèRE, F. - AGHAJARI, N. - BALLUT, L. The iCandida glabrata/i glycogen branching enzyme structure reveals unique features of branching enzymes of the iSaccharomycetaceae/i phylum. In GLYCOBIOLOGY. ISSN 0959-6658, MAR 31 2022, vol. 32, no. 4, p. 343-355. Dostupné na: https://doi.org/10.1093/glycob/cwab110.
    CHEN, L. - DU, M. - WANG, L. - YU, W. - CHEN, Y.R. - CHENG, B.J. - WU, J.D. Maize iSTARCH SYNTHESIS REGULATING PROTEINI/i positively regulates starch biosynthesis in rice endosperm. In FUNCTIONAL PLANT BIOLOGY. ISSN 1445-4408, 2022, vol. 49, no. 9, p. 773-783. Dostupné na: https://doi.org/10.1071/fp21338.
    PENG, X.J. - YU, W. - CHEN, Y.R. - JIANG, Y.L. - JI, Y.R. - CHEN, L. - CHENG, B.J. - WU, J.D. A Maize CBM Domain Containing the Protein ZmCBM48-1 Positively Regulates Starch Synthesis in the Rice Endosperm. In INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. JUN 2022, vol. 23, no. 12. Dostupné na: https://doi.org/10.3390/ijms23126598.
    PRONGJIT, D. - LEKAKARN, H. - BUNTERNGSOOK, B. - AIEWVIRIYASAKUL, K. - SRITUSNEE, W. - ARUNRATTANAMOOK, N. - CHAMPREDA, V. In-Depth Characterization of Debranching Type I Pullulanase from iPriestia koreensis/i HL12 as Potential Biocatalyst for Starch Saccharification and Modification. In CATALYSTS. SEP 2022, vol. 12, no. 9. Dostupné na: https://doi.org/10.3390/catal12091014.
    DUAN, K.W. - BAN, X.F. - WANG, Y.L. - LI, C.M. - GU, Z.B. - LI, Z.F. Improving the Product Specificity of Maltotetraose-Forming Amylase fromi Pseudomonas/ii saccharophila/i STB07 by Removing the Carbohydrate-Binding Module. In JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY. ISSN 0021-8561, OCT 26 2022, vol. 70, no. 42, p. 13709-13718. Dostupné na: https://doi.org/10.1021/acs.jafc.2c05580.
    KategóriaADCA - Vedecké práce v zahraničných karentovaných časopisoch impaktovaných
    Kategória (od 2022)V3 - Vedecký výstup publikačnej činnosti z časopisu
    Typ výstupučlánok
    Rok vykazovania2011
    Registrované vWOS
    Registrované vSCOPUS
    Registrované vCCC
    DOI 10.1016/j.enzmictec.2011.07.002
    článok

    článok

    rokCCIFIF Q (best)JCR Av Jour IF PercSJRSJR Q (best)CiteScore
    A
    rok vydaniarok metrikyIFIF Q (best)SJRSJR Q (best)
    201120102.287Q21.207Q1
Počet záznamov: 1  

  Tieto stránky využívajú súbory cookies, ktoré uľahčujú ich prezeranie. Ďalšie informácie o tom ako používame cookies.