Počet záznamov: 1  

Massive programmed translational jumping in mitochondria

  1. NázovMassive programmed translational jumping in mitochondria
    Autor Lang B. Franz Brejová Broňa

    Vinař Tomáš

    Fričová Dominika    ORCID

    Griač Peter 1960- SAVBIOGE - Ústav biochémie a genetiky živočíchov SAV    SCOPUS    RID    ORCID

    Tomáška Martin

    Nosek J.

    Spoluautori Jakubková Michaela Hegedusová Eva Daoud Rachid Forget Lise Kosa Peter Neboháčová Martina Burger Gertraud
    Zdroj.dok. Proceedings of the National Academy of Sciences of the United States of America. Vol. 111, no 6 (2014) p. 5926-5931
    Jazyk dok.eng - angličtina
    Druh dok.rozpis článkov z periodík (rbx)
    OhlasyFREELY, Kelle C. - FRIEDRICH, Anne - HOU, Jing - SCHACHERER, Joseph. Population Genomic Analysis Reveals Highly Conserved Mitochondrial Genomes in the Yeast Species Lachancea thermotolerans. In GENOME BIOLOGY AND EVOLUTION. ISSN 1759-6653, 2014, vol. 6, no. 10, p. 2586.
    BAINS, William - SCHULZE-MAKUCH, Dirk. Mechanisms of Evolutionary Innovation Point to Genetic Control Logic as the Key Difference Between Prokaryotes and Eukaryotes. In JOURNAL OF MOLECULAR EVOLUTION. ISSN 0022-2844, 2015, vol. 81, no. 1-2, p. 34.
    WONG, Tit-Yee - SCHWARTZBACH, Steve D. Protein Mis-Termination Initiates Genetic Diseases, Cancers, and Restricts Bacterial Genome Expansion. In JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH PART C-ENVIRONMENTAL CARCINOGENESIS & ECOTOXICOLOGY REVIEWS. ISSN 1059-0501, 2015, vol. 33, no. 3, p. 255.
    CALISKAN, Neva - PESKE, Frank - RODNINA, Marina V. Changed in translation: mRNA recoding by-1 programmed ribosomal frameshifting. In TRENDS IN BIOCHEMICAL SCIENCES. ISSN 0968-0004, 2015, vol. 40, no. 5, p. 265.
    AURIAS, Aline. Molecular Biology Mitochondrial Ribosomes Jumpers. IN BIOFUTUR. ISSN 0294-3506, 2014, vol., no. 356, p. 6.
    WITZANY, Guenther. RNA sociology: Group behavioral motifs of RNA consortia. IN Life, 2014, vol. 4, no. 4, p. 800-818.
    SAMATOVA, Ekaterina - KONEVEGA, Andrey L. - WILLS, Norma M. - ATKINS, John F. - RODNINA, Marina V. High-efficiency translational bypassing of non-coding nucleotides specified by mRNA structure and nascent peptide. In NATURE COMMUNICATIONS. ISSN 2041-1723, 2014, vol. 5, no., pp.
    WU, Baojun - HAO, Weilong. A Dynamic Mobile DNA Family in the Yeast Mitochondrial Genome. In G3-GENES GENOMES GENETICS. ISSN 2160-1836, 2015, vol. 5, no. 6,pp. 1273.
    WU, Baojun - BULJIC, Adnan - HAO, Weilong. Extensive Horizontal Transfer and Homologous Recombination Generate Highly Chimeric Mitochondrial Genomes in Yeast. In MOLECULAR BIOLOGY AND EVOLUTION, 2015, vol. 32, no. 10, p. 2559. .
    BARANOV, Pavel V. - ATKINS, John F. - YORDANOVA, Martina M. Augmented genetic decoding: global, local and temporal alterations of decoding processes and codon meaning. In NATURE REVIEWS GENETIC, 2015, vol. 16, no. 9, p. 517. ISSN 1471-0056.
    CALISKAN, Neva - PESKE, Frank - RODNINA, Marina V. Changed in translation: mRNA recoding by-1 programmed ribosomal frameshifting. In TRENDS IN BIOCHEMICAL SCIENCES. ISSN 0968-0004, 2015, vol. 40, no. 5, pp. 265-274.
    KOLONDRA, Adam - LABEDZKA-DMOCH, Karolina - WENDA, Joanna M. - DRZEWICKA, Katarzyna - GOLIK, Pawel. The transcriptome of Candida albicans mitochondria and the evolution of organellar transcription units in yeasts. In BMC GENOMICS, 2015, vol. 16, no., p . ISSN 1471-2164.
    CHEN, Jin - COAKLEY, Arthur - O'CONNOR, Michelle - PETROV, Alexey - O'LEARY, Sean E. - ATKINS, John F. - PUGLISI, Joseph D. Coupling of mRNA Structure Rearrangement to Ribosome Movement during Bypassing of Non-coding Regions. In CELL, 2015, vol. 163, no. 5, p. 1267. ISSN 0092-8674,.
    CHANG, Kai-Chun - WEN, Jin-Der - YANG, Lee-Wei. Functional Importance of Mobile Ribosomal Proteins. In BIOMED RESEARCH INTERNATIONAL, 2015, vol., no., p. ISSN 2314-6133.
    ATKINS, John F. - LOUGHRAN, Gary - BHATT, Pramod R. - FIRTH, Andrew E. - BARANOV, Pavel V. Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use. In NUCLEIC ACIDS RESEARCH. ISSN 0305-1048, 2016, vol. 44, no. 15, pp. 7007-7078.
    CHEN, Jin - CHOI, Junhong - O'LEARY, Sean E. - PRABHAKAR, Arjun - PETROV, Alexey - GROSELY, Rosslyn - PUGLISI, Elisabetta Viani - PUGLISI, Joseph D. The molecular choreography of protein synthesis: translational control, regulation, and pathways. In QUARTERLY REVIEWS OF BIOPHYSICS. ISSN 0033-5835, 2016, vol. 49, no., pp.
    GEORGE, Susanna - AGUIRRE, Jacob D. - SPRATT, Donald E. - BI, Yumin - JEFFERY, Madeline - SHAW, Gary S. - O'DONOGHUE, Patrick. Generation of phospho-ubiquitin variants by orthogonal translation reveals codon skipping. In FEBS LETTERS. ISSN 0014-5793, 2016, vol. 590, no. 10, pp. 1530-1542.
    HEBERLING, Tamra - DAVIS, Lisa - GEDEON, Jakub - MORGAN, Charles - GEDEON, Tomas. A Mechanistic Model for Cooperative Behavior of Co-transcribing RNA Polymerases. In PLOS COMPUTATIONAL BIOLOGY. ISSN 1553-734X, 2016, vol. 12, no. 8, pp.
    LIMA, Matheus Sanita - WOODS, Laura C. - CARTWRIGHT, Matthew W. - SMITH, David Roy. The (in)complete organelle genome: exploring the use and nonuse of available technologies for characterizing mitochondrial and plastid chromosomes. In MOLECULAR ECOLOGY RESOURCES. ISSN 1755-098X, 2016, vol. 16, no. 6, pp. 1279-1286.
    RODNINA, Marina V. - WINTERMEYER, Wolfgang. Protein Elongation, Co-translational Folding and Targeting. In JOURNAL OF MOLECULAR BIOLOGY. ISSN 0022-2836, 2016, vol. 428, no. 10, pp. 2165-2185.
    SMITH, David Roy - KEELING, Patrick J. Protists and the Wild, Wild West of Gene Expression: New Frontiers, Lawlessness, and Misfits. In ANNUAL REVIEW OF MICROBIOLOGY, VOL 70. ISSN 0066-4227, 2016, vol. 70, no., pp. 161-178.
    WANG, Xin-Cun - WU, Kai - CHEN, Haimei - SHAO, Junjie - ZHANG, Nana - CHEN, Xiangdong - LAN, Jin - LIU, Chang. The complete mitochondrial genome of the white-rot fungus Ganoderma meredithiae (Polyporales, Basidiomycota). In MITOCHONDRIAL DNA PART A. ISSN 2470-1394, 2016, vol. 27, no. 6, pp. 4197-4198.
    WANG, Xin-Cun - SHAO, Junjie - LIU, Chang. The complete mitochondrial genome of the medicinal fungus Ganoderma applanatum (Polyporales, Basidiomycota). In MITOCHONDRIAL DNA PART A. ISSN 2470-1394, 2016, vol. 27, no. 4, pp. 2813-2814.
    WANG, Xin-Cun - ZENG, Zhao-Qing - ZHUANG, Wen-Ying. The complete mitochondrial genome of the important phytopathogen Nectria cinnabarina (Hypocreales, Ascomycota). In MITOCHONDRIAL DNA PART A. ISSN 2470-1394, 2016, vol. 27, no. 6, pp. 4670-4671.
    GARCÍA-GUERRERO, Aldo E. - ZAMUDIO-OCHOA, Angélica - CAMACHO-VILLASANA, Yolanda - GARCÍA-VILLEGAS, Rodolfo - PÉREZ-MARTÍNEZ, Xochitl - REYES-PRIETO, Adrián. Evolution of translation in mitochondria. In Evolution of the Protein Synthesis Machinery and Its Regulation, 2016-01-01, pp. 109-142.
    BURGER, Gertraud - MOREIRA, Sandrine - VALACH, Matus. Genes in Hiding. In TRENDS IN GENETICS. ISSN 0168-9525, 2016, vol. 32, no. 9, pp. 553-565.
    WANG, Xin-Cun - ZENG, Zhao-Qing - ZHUANG, Wen-Ying. The complete mitochondrial genome of the important mycoparasite Clonostachys rosea (Hypocreales, Ascomycota). In MITOCHONDRIAL DNA PART B-RESOURCES. ISSN 2380-2359, 2017, vol. 2, no., pp. 180-181.
    SULO, Pavol - SZABOOVA, Dana - BIELIK, Peter - POLAKOVA, Silvia - SOLTYS, Katarina - JATZOVA, Katarina - SZEMES, Tomas. The evolutionary history of Saccharomyces species inferred fromcompleted mitochondrial genomes and revision in the 'yeast mitochondrial genetic code'. In DNA RESEARCH. ISSN 1340-2838, 2017, vol. 24, no. 6, pp. 571-583.
    LIMA, Matheus Sanita - SMITH, David Roy. Pervasive, Genome-Wide Transcription in the Organelle Genomes of Diverse Plastid-Bearing Protists. In G3-GENES GENOMES GENETICS. ISSN 2160-1836, 2017, vol. 7, no. 11, pp. 3789-3796.
    AGIRREZABALA, Xabier - SAMATOVA, Ekaterina - KLIMOVA, Mariia - ZAMORA, Miguel - GIL-CARTON, David - RODNINA, Marina V. - VALLE, Mikel. Ribosome rearrangements at the onset of translational bypassing. In SCIENCE ADVANCES. ISSN 2375-2548, 2017, vol. 3, no. 6, pp.
    XIAO, Shujie - NGUYEN, Duong T. - WU, Baojun - HAO, Weilong. Genetic Drift and Indel Mutation in the Evolution of Yeast Mitochondrial Genome Size. In GENOME BIOLOGY AND EVOLUTION. ISSN 1759-6653, 2017, vol. 9, no. 11, pp. 3088-3099.
    LIMA, Matheus Sanita - SMITH, David Roy. Pervasive Transcription of Mitochondrial, Plastid, and Nucleomorph Genomes across Diverse Plastid-Bearing Species. In GENOME BIOLOGY AND EVOLUTION. ISSN 1759-6653, 2017, vol. 9, no. 10, pp. 2650-2657.
    KERR, Craig H. - WANG, Qing S. - MOON, Kyung-Mee - KEATINGS, Kathleen - ALLAN, Douglas W. - FOSTER, Leonard J. - JAN, Eric. IRES-dependent ribosome repositioning directs translation of a+1 overlapping ORF that enhances viral infection. In NUCLEIC ACIDS RESEARCH. ISSN 0305-1048, 2018, vol. 46, no. 22, pp. 11952-11967.
    WANG, Xin-Cun - ZENG, Zhao-Qing - ZHUANG, Wen-Ying. The complete mitochondrial genome of the bambusicolous fungus Fusarium bambusae (Nectriaceae, Ascomycota). In MITOCHONDRIAL DNA PART B-RESOURCES. ISSN 2380-2359, 2018, vol. 3, no. 2, pp. 1147-1148.
    DROBNÁ, Diana - CELEC, Peter. Mitochondrial DNA (Book Chapter). In Recent advances in mitochondrial medicine and Coenzyme Q10. ISBN: 978-153613150-5;978-153613149-9, Nova Science Publishers, Inc. 2018-01-01, pp. 81-100.
    BRIJDER, Robert - HOOGEBOOM, Hendrik Jan - JONOSKA, Natasa - SAITO, Masahico. Graphs Associated With DNA Rearrangements and Their Polynomials. In ALGEBRAIC AND COMBINATORIAL COMPUTATIONAL BIOLOGY, 2019, vol., no., pp. 61-87.
    MIKHAILOV, Kirill V. - EFEYKIN, Boris D. - PANCHIN, Alexander Y. - KNORRE, Dmitry A. - LOGACHEVA, Maria D. - PENIN, Aleksey A. - MUNTYAN, Maria S. - NIKITIN, Mikhail A. - POPOVA, Olga V. - ZANEGINA, Olga N. - VYSSOKIKH, Mikhail Y. - SPIRIDONOV, Sergei E. - ALEOSHIN, Vladimir V. - PANCHIN, Yuri V. Coding palindromes in mitochondrial genes of Nematomorpha. In NUCLEIC ACIDS RESEARCH. ISSN 0305-1048, 2019, vol. 47, no. 13, pp. 6858-6870.
    KLIMOVA, M. - SENYUSHKINA, T. - SAMATOVA, E. - PENG, B. Z. - PEARSON, M. - PESKE, F. - RODNINA, M. V. EF-G-induced ribosome sliding along the noncoding mRNA. In SCIENCE ADVANCES. ISSN 2375-2548, 2019, vol. 5, no. 6, pp.
    O'LOUGHLIN, Sinead - CAPECE, Mark C. - KLIMOVA, Mariia - WILLS, Norma M. - COAKLEY, Arthur - SAMATOVA, Ekaterina - O'CONNOR, Patrick B. F. - LOUGHRAN, Gary - WEISSMAN, Jonathan S. - BARANOV, Pavel - RODNINA, Marina - PUGLISI, Joseph D. - ATKINS, John F. ( )Polysomes Bypass a 50-Nucleotide Coding Gap Less Efficiently Than Monosomes Due to Attenuation of a 5 ' mRNA Stem-Loop and Enhanced Drop-off. In JOURNAL OF MOLECULAR BIOLOGY. ISSN 0022-2836, 2020, vol. 432, no. 16, pp. 4369-4387. Dostupné na: https://doi.org/10.1016/j.jmb.2020.05.010.
    DE CHIARA, Matteo - FRIEDRICH, Anne - BARRE, Benjamin - BREITENBACH, Michael - SCHACHERER, Joseph - LITI, Gianni. Discordant evolution of mitochondrial and nuclear yeast genomes at population level. In BMC BIOLOGY, 2020, vol. 18, no. 1, pp. Dostupné na: https://doi.org/10.1186/s12915-020-00786-4.
    CHOE, Donghui - PALSSON, Bernhard - CHO, Byung-Kwan. STATR: A simple analysis pipeline of Ribo-Seq in bacteria. In JOURNAL OF MICROBIOLOGY. ISSN 1225-8873, 2020, vol. 58, no. 3, pp. 217-226. Dostupné na: https://doi.org/10.1007/s12275-020-9536-2.
    DUJON, Bernard. Mitochondrial genetics revisited. In YEAST. ISSN 0749-503X, 2020, vol. 37, no. 2, pp. 191-205. Dostupné na: https://doi.org/10.1002/yea.3445.
    RODNINA, Marina - KORNIY, Natalia - KLIMOVA, Mariia - KARKI, Prajwal - PENG, Bee-Zen - SENYUSHKINA, Tamara - BELARDINELLI, Riccardo - MARACCI, Cristina - WOHLGEMUTH, Ingo - SAMATOVA, Ekaterina - PESKE, Frank. Translational recoding: canonical translation mechanisms reinterpreted. In NUCLEIC ACIDS RESEARCH. ISSN 0305-1048, 2020, vol. 48, no. 3, pp. 1056-1067. Dostupné na: https://doi.org/10.1093/nar/gkz783.
    DE LISE, Federica - STRAZZULLI, Andrea - IACONO, Roberta - CURCI, Nicola - DI FENZA, Mauro - MAURELLI, Luisa - MORACCI, Marco - COBUCCI-PONZANO, Beatrice. Programmed Deviations of Ribosomes From Standard Decoding in Archaea. In FRONTIERS IN MICROBIOLOGY. ISSN 1664-302X, 2021, vol. 12, no., pp. Dostupné na: https://doi.org/10.3389/fmicb.2021.688061.
    HAO, Weilong. From Genome Variation to Molecular Mechanisms: What we Have Learned From Yeast Mitochondrial Genomes? In FRONTIERS IN MICROBIOLOGY, 2022, vol. 13, no., pp. Dostupné na: https://doi.org/10.3389/fmicb.2022.806575.
    POULIS, P. - PESKE, F. - RODNINA, M.V. The many faces of ribosome translocation along the mRNA: reading frame maintenance, ribosome frameshifting and translational bypassing. In BIOLOGICAL CHEMISTRY. ISSN 1431-6730, JUL 26 2023, vol. 404, no. 8-9, p. 755-767. Dostupné na: https://doi.org/10.1515/hsz-2023-0142.
    HIMMELSTRAND, K. - DURLING, M.B. - KARLSSON, M. - STENLID, J. - OLSON, A. Multiple rearrangements and low inter- and intra-species mitogenome sequence variation in the Heterobasidion annosum s.l. species complex. In FRONTIERS IN MICROBIOLOGY. MAY 18 2023, vol. 14. Dostupné na: https://doi.org/10.3389/fmicb.2023.1159811.
    KategóriaADCA - Vedecké práce v zahraničných karentovaných časopisoch impaktovaných
    Kategória (od 2022)V3 - Vedecký výstup publikačnej činnosti z časopisu
    Typ výstupučlánok
    Rok vykazovania2014
    Registrované vWOS
    Registrované vSCOPUS
    Registrované vCCC
    DOI 10.1073/pnas.1322190111
    článok

    článok

    rokCCIFIF Q (best)JCR Av Jour IF PercSJRSJR Q (best)CiteScore
    A
    rok vydaniarok metrikyIFIF Q (best)SJRSJR Q (best)
    201420139.809Q16.989Q1
Počet záznamov: 1  

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