Počet záznamov: 1  

Sequencing of the genus Arabidopsis identifies a complex history of nonbifurcating speciation and abundant trans-specific polymorphism

  1. NázovSequencing of the genus Arabidopsis identifies a complex history of nonbifurcating speciation and abundant trans-specific polymorphism
    Autor Novikova Polina Yu
    Spoluautori Hohmann Nora

    Nizhynska Viktoria

    Tsuchimatsu Takashi

    Ali Jamshaid

    Muir Graham

    Guggisberg Alessia

    Paape Tim

    Schmid Karl

    Fedorenko Olga M.

    Holm Svante

    Säll Torbjörn

    Schlötterer Christian

    Marhold Karol 1959- SAVBOTAN - Botanický ústav SAV    RID    ORCID

    Wildmer Alex

    Sese Jun

    Shimizu Kentaro K.

    Weigel Detlef

    Krämer Ute

    Koch Marcus A.

    Nordborg Magnus

    Zdroj.dok. Nature Genetics. Vol. 48, no. 9 (2016), p. 1077-1082
    Jazyk dok.eng - angličtina
    KrajinaUS - Spojené štáty
    Druh dok.rozpis článkov z periodík (rbx)
    OhlasyVIDALIS, A. - ZIVKOVIC, D. - WARDENAAR, R. - ROQUIS, D. - TELLIER, A. - JOHANNES, F. Methylome evolution in plants. In Genome Biology, 2016, vol. 17. ISSN 1474-760X.
    HU, H. - HU, Q.J. - AL-SHEHBAZ, I.A. - LUO, X. - ZENG, T.T. - GUO, X.Y. - LIU, J.Q. Species Delimitation and Interspecific Relationships of the Genus Orychophragmus (Brassicaceae) Inferred from Whole Chloroplast Genomes. In Frontiers in Plant Science, 2016, vol. 7. ISSN 1664-462X.
    MENDES, F.K. - HAHN, Y. - HAHN, M.W. Gene Tree Discordance Can Generate Patterns of Diminishing Convergence over Time. In Molecular Biology and Evolution, 2016, vol. 33, no. 12, p. 3299-3307. ISSN 0737-4038.
    WANG, B.S. - MITCHELL-OLDS, T. Balancing selection and trans-specific polymorphisms. In GENOME BIOLOGY. ISSN 1474-760X, DEC 12 2017, vol. 18.
    SVARDAL, H. - JASINSKA, A.J. - APETREI, C. - COPPOLA, G. - HUANG, Y. - SCHMITT, C.A. - JACQUELIN, B. - RAMENSKY, V. - MULLER-TRUTWIN, M. - ANTONIO, M. - WEINSTOCK, G. - GROBLER, J.P. - DEWAR, K. - WILSON, R.K. - TURNER, T.R. - WARREN, W.C. - FREIMER, N.B. - NORDBORG, M. Ancient hybridization and strong adaptation to viruses across African vervet monkey populations. In NATURE GENETICS. ISSN 1061-4036, DEC 2017, vol. 49, no. 12, p. 1705-+.
    WU, Q. - HAN, T.S. - CHEN, X. - CHEN, J.F. - ZOU, Y.P. - LI, Z.W. - XU, Y.C. - GUO, Y.L. Long-term balancing selection contributes to adaptation in Arabidopsis and its relatives. In GENOME BIOLOGY. ISSN 1474-760X, NOV 15 2017, vol. 18.
    LINDTKE, D. - LUCEK, K. - SORIA-CARRASCO, V. - VILLOUTREIX, R. - FARKAS, T.E. - RIESCH, R. - DENNIS, S.R. - GOMPERT, Z. - NOSIL, P. Long-term balancing selection on chromosomal variants associated with crypsis in a stick insect. In MOLECULAR ECOLOGY. ISSN 0962-1083, NOV 2017, vol. 26, no. 22, p. 6189-6205.
    MATTILA, T.M. - TYRMI, J. - PYHAJARVI, T. - SAVOLAINEN, O. Genome-Wide Analysis of Colonization History and Concomitant Selection in Arabidopsis lyrata. In MOLECULAR BIOLOGY AND EVOLUTION. ISSN 0737-4038, OCT 2017, vol. 34, no. 10, p. 2665-2677.
    RANIL, R.H.G. - PROHENS, J. - AUBRIOT, X. - NIRAN, H.M.L. - PLAZAS, M. - FONSEKA, R.M. - VILANOVA, S. - FONSEKA, H.H. - GRAMAZIO, P. - KNAPP, S. Solanum insanum L. (subgenus Leptostemonum Bitter, Solanaceae), the neglected wild progenitor of eggplant (S-melongena L.): a review of taxonomy, characteristics and uses aimed at its enhancement for improved eggplant breeding. In GENETIC RESOURCES AND CROP EVOLUTION. ISSN 0925-9864, OCT 2017, vol. 64, no. 7, p. 1707-1722.
    PARKER, J. - HELMSTETTER, A.J. - DEVEY, D. - WILKINSON, T. - PAPADOPULOS, A.S.T. Field-based species identification of closely-related plants using real-time nanopore sequencing. In SCIENTIFIC REPORTS. ISSN 2045-2322, AUG 21 2017, vol. 7.
    ASAF, S. - KHAN, A.L. - KHAN, M.A. - WAQAS, M. - KANG, S.M. - YUN, B.W. - LEE, I.J. Chloroplast genomes of Arabidopsis halleri ssp gemmifera and Arabidopsis lyrata ssp petraea: Structures and comparative analysis. In SCIENTIFIC REPORTS. ISSN 2045-2322, AUG 8 2017, vol. 7.
    BECHSGAARD, J. - JORGENSEN, T.H. - SCHIERUP, M.H. Evidence for Adaptive Introgression of Disease Resistance Genes Among Closely Related Arabidopsis Species. In G3-GENES GENOMES GENETICS. ISSN 2160-1836, AUG 2017, vol. 7, no. 8, p. 2677-2683.
    LIU, Y.F. - LI, D.W. - ZHANG, Q. - SONG, C. - ZHONG, C.H. - ZHANG, X.D. - WANG, Y. - YAO, X.H. - WANG, Z.P. - ZENG, S.H. - WANG, Y. - GUO, Y.T. - WANG, S.B. - LI, X.W. - LI, L. - LIU, C.Y. - MCCANN, H.C. - HE, W.M. - NIU, Y. - CHEN, M. - DU, L.W. - GONG, J.J. - DATSON, P.M. - HILARIO, E. - HUANG, H.W. Rapid radiations of both kiwifruit hybrid lineages and their parents shed light on a two-layer mode of species diversification. In NEW PHYTOLOGIST. ISSN 0028-646X, JUL 2017, vol. 215, no. 2, p. 877-890.
    VALTUENA, F.J. - RODRIGUEZ-RLANO, T. - LOPEZ, J. - MAYO, C. - ORTEGA-OLIVENCIA, A. Peripatric speciation in an endemic Macaronesian plant after recent divergence from a widespread relative. In PLOS ONE. ISSN 1932-6203, JUN 2 2017, vol. 12, no. 6.
    DE LA HARPE, M. - PARIS, M. - KARGER, D.N. - ROLLAND, J. - KESSLER, M. - SALAMIN, N. - LEXER, C. Molecular ecology studies of species radiations: current research gaps, opportunities and challenges. In MOLECULAR ECOLOGY. ISSN 0962-1083, MAY 2017, vol. 26, no. 10, p. 2608-2622.
    YANT, L. - BOMBLIES, K. Genomic studies of adaptive evolution in outcrossing Arabidopsis species. In CURRENT OPINION IN PLANT BIOLOGY. ISSN 1369-5266, APR 2017, vol. 36, p. 9-14.
    NIKOLOV, L.A. - TSIANTIS, M. Using mustard genomes to explore the genetic basis of evolutionary change. In CURRENT OPINION IN PLANT BIOLOGY. ISSN 1369-5266, APR 2017, vol. 36, p. 119-128.
    HU, Y.H. - WOESTE, K.E. - ZHAO, P. Completion of the Chloroplast Genomes of Five Chinese Juglans and Their Contribution to Chloroplast Phylogeny. In FRONTIERS IN PLANT SCIENCE. ISSN 1664-462X, JAN 6 2017, vol. 7.
    COOK, D.E. - ZDRALJEVIC, S. - ROBERTS, J.P. - ANDERSEN, E.C. CeNDR, the Caenorhabditis elegans natural diversity resource. In NUCLEIC ACIDS RESEARCH. ISSN 0305-1048, JAN 4 2017, vol. 45, no. D1, p. D650-D657.
    ROUARD, Mathieu - DROC, Gaetan - MARTIN, Guillaume - SARDOS, Julie - HUEBER, Yann - GUIGNON, Valentin - CENCI, Alberto - GEIGLE, Bjorn - HIBBINS, Mark S. - YAHIAOUI, Nabila - BAURENS, Franc-Christophe - BERRY, Vincent - HAHN, Matthew W. - D'HONT, Angelique - ROUX, Nicolas. Three New Genome Assemblies Support a Rapid Radiation in Musa acuminata (Wild Banana). In GENOME BIOLOGY AND EVOLUTION. ISSN 1759-6653, DEC 2018, vol. 10, no. 12, p. 3129-3140.
    LANGDON, Quinn K. - PERIS, David - KYLE, Brian - HITTINGER, Chris Todd. spplDer: A Species Identification Tool to Investigate Hybrid Genomes with High-Throughput Sequencing. In MOLECULAR BIOLOGY AND EVOLUTION. ISSN 0737-4038, NOV 2018, vol. 35, no. 11, p. 2835-2849.
    BECKMAN, Elizabeth J. - BENHAM, Phred M. - CHEVIRON, Zachary A. - WITT, Christopher C. Detecting introgression despite phylogenetic uncertainty: The case of the South American siskins. In MOLECULAR ECOLOGY. ISSN 0962-1083, NOV 2018, vol. 27, no. 22, p. 4350-4367.
    KIM, Bernard Y. - WEI, Xinzeng - FITZ-GIBBON, Sorel - LOHMUELLER, Kirk E. - ORTEGO, Joaquin - GUGGER, Paul F. - SORK, Victoria L. RADseq data reveal ancient, but not pervasive, introgression between Californian tree and scrub oak species (Quercus sect. Quercus: Fagaceae). In MOLECULAR ECOLOGY. ISSN 0962-1083, NOV 2018, vol. 27, no. 22, p. 4556-4571.
    KW, Bernard Y. - HUBER, Christian D. - LOHMUELLER, Kirk E. Deleterious variation shapes the genomic landscape of introgression. In PLOS GENETICS. ISSN 1553-7404, OCT 2018, vol. 14, no. 10.
    LOPES, Amanda de Santana - PACHECO, Tulio Gomes - VIEIRA, Leila do Nascimento - GUERRA, Miguel Pedro - NODARI, Rubens Onofre - DE SOUZA, Emanuel Maltempi - PEDROSA, Fabio de Oliveira - ROGALSKI, Marcelo. The Crambe abyssinica plastome: Brassicaceae phylogenomic analysis, evolution of RNA editing sites, hotspot and microsatellite characterization of the tribe Brassiceae. In GENE. ISSN 0378-1119, SEP 10 2018, vol. 671, p. 36-49.
    WU, Meng - KOSTYUN, Jamie L. - HAHN, Matthew W. - MOYLE, Leonie C. Dissecting the basis of novel trait evolution in a radiation with widespread phylogenetic discordance. In MOLECULAR ECOLOGY. ISSN 0962-1083, AUG 2018, vol. 27, no. 16, p. 3301-3316.
    HUBER, Christian D. - DURVASULA, Arun - HANCOCK, Angela M. - LOHMUELLER, Kirk E. Gene expression drives the evolution of dominance. In NATURE COMMUNICATIONS. ISSN 2041-1723, JUL 16 2018, vol. 9.
    HANADA, Kousuke - TEZUKA, Ayumi - NOZAWA, Masafumi - SUZUKI, Yutaka - SUGANO, Sumio - NAGANO, Atsushi J. - ITO, Motomi - MORINAGA, Shin-Ichi. Functional divergence of duplicate genes several million years after gene duplication in Arabidopsis. In DNA RESEARCH. ISSN 1340-2838, JUN 2018, vol. 25, no. 3, p. 327-339.
    LI, Ling - LIU, Bo - DENG, Xiaomei - ZHAO, Hainan - LI, Hongyan - XING, Shilai - FETZER, Della D. - LI, Mengya - NASRALLAH, Mikhail E. - NASRALLAH, June B. - LIU, Pei. Evolution of interspecies unilateral incompatibility in the relatives of Arabidopsis thaliana. In MOLECULAR ECOLOGY. ISSN 0962-1083, JUN 2018, vol. 27, no. 12, p. 2742-2753.
    MOORE, Abigail J. - DE VOS, Jurriaan M. - HANCOCK, Lillian P. - GOOLSBY, Eric - EDWARDS, Erika J. Targeted Enrichment of Large Gene Families for Phylogenetic Inference: Phylogeny and Molecular Evolution of Photosynthesis Genes in the Portullugo Clade (Caryophyllales). In SYSTEMATIC BIOLOGY. ISSN 1063-5157, MAY 2018, vol. 67, no. 3, p. 367-383.
    MANZANILLA, V. - KOOL, A. - NGUYEN NHAT, L. - NONG VAN, H. - LE THI THU, H. - DE BOER, H. J. Phylogenomics and barcoding of Panax: toward the identification of ginseng species. In BMC EVOLUTIONARY BIOLOGY. ISSN 1471-2148, APR 3 2018, vol. 18.
    CORSO, Massimiliano - SCHVARTZMAN, M. Sol - GUZZO, Flavia - SOUARD, Florence - MALKOWSKI, Eugeniusz - HANIKENNE, Marc - VERBRUGGEN, Nathalie. Contrasting cadmium resistance strategies in two metallicolous populations of Arabidopsis halleri. In NEW PHYTOLOGIST. ISSN 0028-646X, APR 2018, vol. 218, no. 1, p. 283-297.
    WESTON, David J. - TURETSKY, Merritt R. - JOHNSON, Matthew G. - GRANATH, Gustaf - LINDO, Zoe - BELYEA, Lisa R. - RICE, Steven K. - HANSON, David T. - ENGELHARDT, Katharina A. M. - SCHMUTZ, Jeremy - DORREPAAL, Ellen - EUSKIRCHEN, Eugenie S. - STENOIEN, Hans K. - SZOVENYI, Peter - JACKSON, Michelle - PIATKOWSKI, Bryan T. - MUCHERO, Wellington - NORBY, Richard J. - KOSTKA, Joel E. - GLASS, Jennifer B. - RYDIN, Hakan - LIMPENS, Juul - TUITTILA, Eeva-Stiina - ULLRICH, Kristian K. - CARRELL, Alyssa - BENSCOTER, Brian W. - CHEN, Jin-Gui - OKE, Tobi A. - NILSSON, Mats B. - RANJAN, Priya - JACOBSON, Daniel - LILLESKOV, Erik A. - CLYMO, R. S. - SHAW, A. Jonathan. The Sphagnome Project: enabling ecological and evolutionary insights through a genus-level sequencing project. In NEW PHYTOLOGIST. ISSN 0028-646X, JAN 2018, vol. 217, no. 1, p. 16-25.
    PINEIRO, Laura Fernandez - BYERS, Kelsey J. R. . P. - CAI, Jing - SEDEEK, Khalid E. M. - KELLENBERGER, Roman T. - RUSSO, Alessia - QI, Weihong - FOURNIER, Catharine Aquino - SCHLUETER, Philipp M. A Phylogenomic Analysis of the Floral Transcriptomes of Sexually Deceptive and Rewarding European Orchids, Ophrys and Gymnadenia. In FRONTIERS IN PLANT SCIENCE. ISSN 1664-462X, NOV 29 2019, vol. 10, art. no. 1553
    MARBURGER, Sarah - MONNAHAN, Patrick - SEEAR, Paul J. - MARTIN, Simon H. - KOCH, Jordan - PAAJANEN, Pirita - BOHUTINSKA, Magdalena - HIGGINS, James D. - SCHMICKL, Roswitha - YANT, Levi. Interspecific introgression mediates adaptation to whole genome duplication. In NATURE COMMUNICATIONS. ISSN 2041-1723, NOV 18 2019, vol. 10, art. no. 5218
    CALASAN, Anze Zerdoner - SEREGIN, Alexey P. - HURKA, Herbert - HOFFORD, Nathaniel P. - NEUFFER, Barbara. The Eurasian steppe belt in time and space: Phylogeny and historical biogeography of the false flax (Camelina Crantz, Camelineae, Brassicaceae). In FLORA. ISSN 0367-2530, NOV 2019, vol. 260, art. no. 151477
    PALACIOS, Catalina - GARCIA-R, Silvana - LUIS PARRA, Juan - CUERVO, Andres M. - GARY STILES, F. - MCCORMACK, John E. - DANIEL CADENA, Carlos. Shallow genetic divergence and distinct phenotypic differences between two Andean hummingbirds: Speciation with gene flow?. In AUK. ISSN 0004-8038, OCT 2019, vol. 136, no. 4, art. no. ukz046
    STIFT, Marc - KOLAR, Filip - MEIRMANS, Patrick G. STRUCTURE is more robust than other clustering methods in simulated mixed-ploidy populations. In HEREDITY. ISSN 0018-067X, OCT 2019, vol. 123, no. 4, p. 429-441.
    DITTBERNER, Hannes - BECKER, Christian - JIAO, Wen-Biao - SCHNEEBERGER, Korbinian - HOELZEL, Norbert - TELLIER, Aurelien - DE MEAUX, Juliette. Strengths and potential pitfalls of hay transfer for ecological restoration revealed by RAD-seq analysis in floodplain Arabis species. In MOLECULAR ECOLOGY. ISSN 0962-1083, SEP 2019, vol. 28, no. 17, p. 3887-3901.
    ZHONG, Linling - LIU, Huanhuan - RU, Dafu - HU, Huan - HU, Quanjun. Population genomic evidence for radiative divergence of four Orychophragmus (Brassicaceae) species in eastern Asia. In BOTANICAL JOURNAL OF THE LINNEAN SOCIETY. ISSN 0024-4074, SEP 2019, vol. 191, no. 1, p. 18-29.
    MACQUEEN, Alice - TIAN, Dacheng - CHANG, Wenhan - HOLUB, Eric - KREITMAN, Martin - BERGELSON, Joy. Population Genetics of the Highly Polymorphic RPP8 Gene Family. In GENES. SEP 2019, vol. 10, no. 9, art. no. 691
    MENDES, Fabio K. - LIVERA, Andrew P. - HAHN, Matthew W. The perils of intralocus recombination for inferences of molecular convergence. In PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES. ISSN 0962-8436, JUL 22 2019, vol. 374, no. 1777, SI, art. no. 20180244
    GRIFFITHS, Andrew G. - MORAGA, Roger - TAUSEN, Marni - GUPTA, Vikas - BILTON, Timothy P. - CAMPBELL, Matthew A. - ASHBY, Rachael - NAGY, Istvan - KHAN, Anar - LARKING, Anna - ANDERSON, Craig - FRANZMAYR, Benjamin - HANCOCK, Kerry - SCOTT, Alicia - ELLISON, Nick W. - COX, Murray P. - ASP, Torben - MAILUND, Thomas - SCHIERUP, Mikkel H. - ANDERSEN, Stig Uggerhoj. Breaking Free: The Genomics of Allopolyploidy-Facilitated Niche Expansion in White Clover. In PLANT CELL. ISSN 1040-4651, JUL 2019, vol. 31, no. 7, p. 1466-1487.
    BOUZID, M. - HE, F. - SCHMITZ, G. - HAEUSLER, R. E. - WEBER, A. P. M. - METTLER-ALTMANN, T. - DE MEAUX, J. Arabidopsis species deploy distinct strategies to cope with drought stress. In ANNALS OF BOTANY. ISSN 0305-7364, JUN 28 2019, vol. 124, no. 1, p. 27-40.
    KARAM, Marie-Joe - SOULEMAN, Dima - SCHVARTZMAN, M. Sol - GALLINA, Sophie - SPIELMANN, Julien - PONCET, Charles - BOUCHEZ, Olivier - PAUWELS, Maxime - HANIKENNE, Marc - FREROT, Helene. Genetic architecture of a plant adaptive trait: QTL mapping of intraspecific variation for tolerance to metal pollution in Arabidopsis halleri. In HEREDITY. ISSN 0018-067X, JUN 2019, vol. 122, no. 6, p. 877-892.
    WANG, Tian-Jing - RU, Da-Fu - ZHANG, Dan - HU, Quan-Jun. Analyses of genome-scale variation reveal divergence of two Sinalliaria species (Brassicaceae) with continuous but limited gene flow. In JOURNAL OF SYSTEMATICS AND EVOLUTION. ISSN 1674-4918, MAY 2019, vol. 57, no. 3, p. 268-277.
    GLEMIN, Sylvain - SCORNAVACCA, Celine - DAINAT, Jacques - BURGARELLA, Concetta - VIADER, Veronique - ARDISSON, Morgane - SARAH, Gautier - SANTONI, Sylvain - DAVID, Jacques - RANWEZ, Vincent. Pervasive hybridizations in the history of wheat relatives. In SCIENCE ADVANCES. ISSN 2375-2548, MAY 2019, vol. 5, no. 5, art. no. eaav9188
    HSU, Che-Wei - LO, Cheng-Yu - LEE, Cheng-Ruei. On the postglacial spread of human commensal Arabidopsis thaliana: journey to the East. In NEW PHYTOLOGIST. ISSN 0028-646X, MAY 2019, vol. 222, no. 3, p. 1447-1457.
    JAZAYERI, S. M. - GARCIA CRUZATTY, L. C. - VILLAMAR-TORRES, R. GENOMIC COMPARISON AMONG THREE ARABIDOPSIS SPECIES REVEALED HEAVY METAL RESPONSIVE GENES. In JOURNAL OF ANIMAL AND PLANT SCIENCES. ISSN 1018-7081, APR 2019, vol. 29, no. 2, p. 539-548.
    FENG, Shuo - RU, Dafu - SUN, Yongshuai - MAO, Kangshan - MILNE, Richard - LIU, Jianquan. Trans-lineage polymorphism and nonbifurcating diversification of the genus Picea. In NEW PHYTOLOGIST. ISSN 0028-646X, APR 2019, vol. 222, no. 1, p. 576-587.
    WU, Meng - KOSTYUN, Jamie L. - MOYLE, Leonie C. Genome Sequence of Jaltomata Addresses Rapid Reproductive Trait Evolution and Enhances Comparative Genomics in the Hyper-Diverse Solanaceae. In GENOME BIOLOGY AND EVOLUTION. ISSN 1759-6653, FEB 2019, vol. 11, no. 2, p. 335-349.
    KRYVOKHYZHA, Dmytro - SALCEDO, Adriana - ERIKSSON, Mimmi C. - DUAN, Tianlin - TAWARI, Nilesh - CHEN, Jun - GUERRINA, Maria - KREINER, Julia M. - KENT, Tyler V. - LAGERCRANTZ, Ulf - STINCHCOMBE, John R. - GLEMIN, Sylvain - WRIGHT, Stephen, I - LASCOUX, Martin. Parental legacy, demography, and admixture influenced the evolution of the two subgenomes of the tetraploid Capsella bursa-pastoris (Brassicaceae). In PLOS GENETICS. ISSN 1553-7404, FEB 2019, vol. 15, no. 2, art. no. e1007949
    TAKOU, Margarita - WIETERS, Benedict - KOPRIVA, Stanislav - COUPLAND, George - LINSTAEDTER, Anja - DE MEAUX, Juliette. Linking genes with ecological strategies in Arabidopsis thaliana. In JOURNAL OF EXPERIMENTAL BOTANY. ISSN 0022-0957, FEB 1 2019, vol. 70, no. 4, p. 1141-1151.
    CORBETT-DETIG, Russell - MEDINA, Paloma - FREROT, Helene - BLASSIAU, Christelle - CASTRIC, Vincent. Bulk pollen sequencing reveals rapid evolution of segregation distortion in the male germline of Arabidopsis hybrids. In EVOLUTION LETTERS. FEB 2019, vol. 3, no. 1, p. 93-103.
    DE LA HARPE, Marylaure - HESS, Jaqueline - LOISEAU, Oriane - SALAMIN, Nicolas - LEXER, Christian - PARIS, Margot. A dedicated target capture approach reveals variable genetic markers across micro- and macro-evolutionary time scales in palms. In MOLECULAR ECOLOGY RESOURCES. ISSN 1755-098X, JAN 2019, vol. 19, no. 1, p. 221-234.
    MOLINA-HENAO, Y. Franchesco - HOPKINS, Robin. Autopolyploid lineage shows climatic niche expansion but not divergence in Arabidopsis arenosa. In AMERICAN JOURNAL OF BOTANY. ISSN 0002-9122, JAN 2019, vol. 106, no. 1, p. 61-70.
    VAID, Neha - LAITINEN, Roosa A. E. Diverse paths to hybrid incompatibility in Arabidopsis. In PLANT JOURNAL. ISSN 0960-7412, JAN 2019, vol. 97, no. 1, SI, p. 199-213.
    GERMAN, D. A. Nomenclatural notes on Cruciferae. In Turczaninowia. ISSN 15607259, 2019, vol. 22, no. 4, p. 210-219.
    CALHOUN, Christopher S. - CRIST, Deborah K. - KNEE, Emma M. - PRICE, Courtney G. - LINDSEY, Benson E. - MARIOLA CASTREJON, D. - NAGY, Eva - MANN, James W. - MILLER, Julie A. - GROTEWOLD, Erich - KEITH SLOTKIN, R. - BRKLJACIC, Jelena. The genetic resources of Arabidopsis thaliana the arabidopsis biological resource center. In The Biological Resources of Model Organisms, 2019, p. 13-34.
    ZUEST, Tobias - STRICKLER, Susan R. - POWELL, Adrian F. - MABRY, Makenzie E. - AN, Hong - MIRZAEI, Mahdieh - YORK, Thomas - HOLLAND, Cynthia K. - KUMAR, Pavan - ERB, Matthias - PETSCHENKA, Georg - GOMEZ, Jose-Maria - PERFECTTI, Francisco - MUELLER, Caroline - PIRES, J. Chris - MUELLER, Lukas A. - JANDER, Georg. Independent evolution of ancestral and novel defenses in a genus of toxic plants (Erysimum, Brassicaceae). In ELIFE. ISSN 2050-084X, APR 7 2020, vol. 9.
    CHEN, Jun - GLEMIN, Sylvain - LASCOUX, Martin. From Drift to Draft: How Much Do Beneficial Mutations Actually Contribute to Predictions of Ohta's Slightly Deleterious Model of Molecular Evolution?. In GENETICS. ISSN 0016-6731, APR 2020, vol. 214, no. 4, p. 1005-1018.
    SVARDAL, Hannes - QUAH, Fu Xiang - MALINSKY, Milan - NGATUNGA, Benjamin P. - MISKA, Eric A. - SALZBURGER, Walter - GENNER, Martin J. - TURNER, George F. - DURBIN, Richard. Ancestral Hybridization Facilitated Species Diversification in the Lake Malawi Cichlid Fish Adaptive Radiation. In MOLECULAR BIOLOGY AND EVOLUTION. ISSN 0737-4038, APR 2020, vol. 37, no. 4, p. 1100-1113.
    ARMSTRONG, Jessica J. - TAKEBAYASHI, Naoki - WOLF, Diana E. Cold tolerance in the genus Arabidopsis. In AMERICAN JOURNAL OF BOTANY. ISSN 0002-9122, MAR 2020, vol. 107, no. 3, p. 489-497.
    WANG, Mingcheng - ZHANG, Lei - ZHANG, Zhiyang - LI, Mengmeng - WANG, Deyan - ZHANG, Xu - XI, Zhenxiang - KEEFOVER-RING, Ken - SMART, Lawrence B. - DIFAZIO, Stephen P. - OLSON, Matthew S. - YIN, Tongming - LIU, Jianquan - MA, Tao. Phylogenomics of the genus Populus reveals extensive interspecific gene flow and balancing selection. In NEW PHYTOLOGIST. ISSN 0028-646X, FEB 2020, vol. 225, no. 3, SI, p. 1370-1382.
    WALDEN, Nora - LUCEK, Kay - WILLI, Yvonne. Lineage-specific adaptation to climate involves flowering time in North American Arabidopsis lyrata. In MOLECULAR ECOLOGY. ISSN 0962-1083, APR 2020, vol. 29, no. 8, p. 1436-1451.
    BURGHGRAEVE, N. - SIMON, S. - BARRAL, S. - FOBIS-LOISY, I. - HOLL, A.C. - PONITZKI, C. - SCHMITT, E. - VEKEMANS, X. - CASTRIC, V. Base-Pairing Requirements for Small RNA-Mediated Gene Silencing of Recessive Self-Incompatibility Alleles inArabidopsis halleri. In GENETICS. ISSN 0016-6731, JUL 2020, vol. 215, no. 3, p. 653-664.
    LEE, R.R.Q. - CHAE, E. Variation Patterns of NLR Clusters in Arabidopsis thaliana Genomes. In PLANT COMMUNICATIONS. ISSN 2590-3462, JUL 13 2020, vol. 1, no. 4, SI.
    DE LA HARPE, M. - PARIS, M. - HESS, J. - BARFUSS, M.H.J. - SERRANO-SERRANO, M.L. - GHATAK, A. - CHATURVEDI, P. - WECKWERTH, W. - TILL, W. - SALAMIN, N. - WAI, C.M. - MING, R. - LEXER, C. Genomic footprints of repeated evolution ofCAMphotosynthesis in a Neotropical species radiation. In PLANT CELL AND ENVIRONMENT. ISSN 0140-7791, DEC 2020, vol. 43, no. 12, SI, p. 2987-3001.
    EBERT, D. - FIELDS, P.D. Host-parasite co-evolution and its genomic signature. In NATURE REVIEWS GENETICS. ISSN 1471-0056, DEC 2020, vol. 21, no. 12, p. 754-768.
    SHANG, H.Y. - HESS, J. - PICKUP, M. - FIELD, D.L. - INGVARSSON, P.K. - LIU, J.Q. - LEXER, C. Evolution of strong reproductive isolation in plants: broad-scale patterns and lessons from a perennial model group. In PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES. ISSN 0962-8436, AUG 31 2020, vol. 375, no. 1806, SI.
    FORSYTHE, E.S. - NELSON, A.D.L. - BEILSTEIN, M.A. Biased Gene Retention in the Face of Introgression Obscures Species Relationships. In GENOME BIOLOGY AND EVOLUTION. ISSN 1759-6653, SEP 2020, vol. 12, no. 9, p. 1646-1663.
    SZOPINSKI, M. - SITKO, K. - RUSINOWSKI, S. - ZIELEZNIK-RUSINOWSKA, P. - CORSO, M. - ROSTANSKI, A. - ROJEK-JELONEK, M. - VERBRUGGEN, N. - MALKOWSKI, E. Different strategies of Cd tolerance and accumulation inArabidopsis halleriandArabidopsis arenosa. In PLANT CELL AND ENVIRONMENT. ISSN 0140-7791, DEC 2020, vol. 43, no. 12, SI, p. 3002-3019.
    HIBBINS, M.S. - GIBSON, M.J.S. - HAHN, M.W. Determining the probability of hemiplasy in the presence of incomplete lineage sorting and introgression. In ELIFE. ISSN 2050-084X, DEC 21 2020, vol. 9.
    JACOBS, Sarah J. - GRUNDLER, Michael C. - HENRIQUEZ, Claudia L. - ZAPATA, Felipe. An integrative genomic and phenomic analysis to investigate the nature of plant species in Escallonia (Escalloniaceae). In SCIENTIFIC REPORTS. ISSN 2045-2322, DEC 14 2021, vol. 11, no. 1.
    QIAO, Qin - EDGER, Patrick P. - XUE, Li - QIONG, La - LU, Jie - ZHANG, Yichen - CAO, Qiang - YOCCA, Alan E. - PLATTS, Adrian E. - KNAPP, Steven J. - VAN MONTAGU, Marc - VAN DE PEER, Yves - LEI, Jiajun - ZHANG, Ticao. Evolutionary history and pan-genome dynamics of strawberry (Fragaria spp.). In PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. ISSN 0027-8424, NOV 9 2021, vol. 118, no. 45.
    ZHOU, Cong - ZHANG, Qian - CHEN, Yu - HUANG, Jin - GUO, Qin - LI, Yi - WANG, Wensheng - QIU, Yongfu - GUAN, Wei - ZHANG, Jing - GUO, Jianping - SHI, Shaojie - WU, Di - ZHENG, Xiaohong - NIE, Lingyun - TAN, Jiaoyan - HUANG, Chaomei - MA, Yinhua - YANG, Fang - FU, Xiqin - DU, Bo - ZHU, Lili - CHEN, Rongzhi - LI, Zhikang - YUAN, Longping - HE, Guangcun. Balancing selection and wild gene pool contribute to resistance in global rice germplasm against planthopper. In JOURNAL OF INTEGRATIVE PLANT BIOLOGY. ISSN 1672-9072, OCT 2021, vol. 63, no. 10, p. 1695-1711.
    JIANG, Xinyu - SONG, Qingxin - YE, Wenxue - CHEN, Z. Jeffrey. Concerted genomic and epigenomic changes accompany stabilization of Arabidopsis allopolyploids. In NATURE ECOLOGY & EVOLUTION. ISSN 2397-334X, OCT 2021, vol. 5, no. 10, p. 1382-+.
    KONECNA, Veronika - BRAY, Sian - VLCEK, Jakub - BOHUTINSKA, Magdalena - POZAROVA, Doubravka - CHOUDHURY, Rimjhim Roy - BOLLMANN-GIOLAI, Anita - FLIS, Paulina - SALT, David E. - PARISOD, Christian - YANT, Levi - KOLAR, Filip. Parallel adaptation in autopolyploid Arabidopsis arenosa is dominated by repeated recruitment of shared alleles. In NATURE COMMUNICATIONS. AUG 17 2021, vol. 12, no. 1.
    BOHUTINSKA, Magdalena - VLCEK, Jakub - YAIR, Sivan - LAENEN, Benjamin - KONECNA, Veronika - FRACASSETTI, Marco - SLOTTE, Tanja - KOLAR, Filip. Genomic basis of parallel adaptation varies with divergence in Arabidopsis and its relatives. In PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. ISSN 0027-8424, MAY 25 2021, vol. 118, no. 21.
    YANG, Yan-Ting - YANG, Xu-Chen - WANG, Ming-Cheng - ZHONG, Lin-Ling - MA, Rui - MA, Tao - LIU, Jian-Quan - DAVIS, Charles C. - XI, Zhen-Xiang. Species delimitation of North American Nyssa species. In JOURNAL OF SYSTEMATICS AND EVOLUTION. ISSN 1674-4918, 2021.
    CADENA, Carlos Daniel - ZAPATA, Felipe. The genomic revolution and species delimitation in birds (and other organisms): Why phenotypes should not be overlooked. In ORNITHOLOGY. ISSN 0004-8038, APR 6 2021, vol. 138, no. 2.
    FENG, Chao - WANG, Jing - HARRIS, A. J. - FOLTA, Kevin M. - ZHAO, Mizhen - KANG, Ming. Tracing the Diploid Ancestry of the Cultivated Octoploid Strawberry. In MOLECULAR BIOLOGY AND EVOLUTION. ISSN 0737-4038, FEB 2021, vol. 38, no. 2, p. 478-485.
    SVARDAL, Hannes - SALZBURGER, Walter - MALINSKY, Milan. Genetic Variation and Hybridization in Evolutionary Radiations of Cichlid Fishes. In ANNUAL REVIEW OF ANIMAL BIOSCIENCES, VOL 9, 2021. ISSN 2165-8102, 2021, vol. 9, p. 55-79.
    WILLI, Y. - LUCEK, K. - BACHMANN, O. - WALDEN, N. Recent speciation associated with range expansion and a shift to self-fertilization in North American iArabidopsis/i. In NATURE COMMUNICATIONS. DEC 8 2022, vol. 13, no. 1. Dostupné na: https://doi.org/10.1038/s41467-022-35368-1.
    LIU, Y.F. - QIN, A.L. - WANG, Y. - NIE, W. - TAN, C.C. - AN, S.P. - WANG, J.H. - CHANG, E.M. - JIANG, Z.P. - JIA, Z.R. Interspecific Gene Flow and Selective Sweeps in iPicea wilsonii/i, iP. neoveitchii/i and iP. likiangensis/i. In PLANTS-BASEL. NOV 2022, vol. 11, no. 21. Dostupné na: https://doi.org/10.3390/plants11212993.
    SANCHO, R. - INDA, L.A. - DIAZ-PEREZ, A. - DES MARAIS, D.L. - GORDON, S. - VOGEL, J.P. - LUSINSKA, J. - HASTEROK, R. - CONTRERAS-MOREIRA, B. - CATALAN, P. Tracking the ancestry of known and 'ghost' homeologous subgenomes in model grass Brachypodium polyploids. In PLANT JOURNAL. ISSN 0960-7412, MAR 2022, vol. 109, no. 6, p. 1535-1558. Dostupné na: https://doi.org/10.1111/tpj.15650.
    HIBBINS, M.S. - HAHN, M.W. Phylogenomic approaches to detecting and characterizing introgression. In GENETICS. ISSN 0016-6731, FEB 4 2022, vol. 220, no. 2. Dostupné na: https://doi.org/10.1093/genetics/iyab173.
    DITTBERNER, H. - TELLIER, A. - DE MEAUX, J. Approximate Bayesian Computation Untangles Signatures of Contemporary and Historical Hybridization between Two Endangered Species. In MOLECULAR BIOLOGY AND EVOLUTION. ISSN 0737-4038, FEB 3 2022, vol. 39, no. 2. Dostupné na: https://doi.org/10.1093/molbev/msac015.
    BROCK, J.R. - MANDáKOVá, T. - MCKAIN, M. - LYSAK, M.A. - OLSEN, K.M. Chloroplast phylogenomics in iCamelina/i (Brassicaceae) reveals multiple origins of polyploid species and the maternal lineage of C. isativa/i. In HORTICULTURE RESEARCH. ISSN 2662-6810, JAN 5 2022, vol. 9. Dostupné na: https://doi.org/10.1093/hr/uhab050.
    YANG, Y.T. - YANG, X.C. - WANG, M.C. - ZHONG, L.L. - MA, R. - MA, T. - LIU, J.Q. - DAVIS, C.C. - XI, Z.X. Species delimitation of North American iNyssa/i species. In JOURNAL OF SYSTEMATICS AND EVOLUTION. ISSN 1674-4918, JUL 2022, vol. 60, no. 4, p. 747-758. Dostupné na: https://doi.org/10.1111/jse.12725.
    KategóriaADCA - Vedecké práce v zahraničných karentovaných časopisoch impaktovaných
    Kategória (od 2022)V3 - Vedecký výstup publikačnej činnosti z časopisu
    Typ výstupučlánok
    Rok vykazovania2016
    Registrované vWOS
    Registrované vSCOPUS
    Registrované vCCC
    DOI 10.1038/ng.3617
    článok

    článok

    Názov súboruPrístupVeľkosťStiahnutéTypLicence
    Sequencing of the genus Arabidopsis identifies a complex history of nonbifurcating speciation and abundant trans-specific polymorphism.pdfNeprístupný/archív2.1 MB2Vydavateľská verzia
    rokCCIFIF Q (best)JCR Av Jour IF PercSJRSJR Q (best)CiteScore
    A
    rok vydaniarok metrikyIFIF Q (best)SJRSJR Q (best)
    2016201531.616Q124.157Q1
Počet záznamov: 1  

  Tieto stránky využívajú súbory cookies, ktoré uľahčujú ich prezeranie. Ďalšie informácie o tom ako používame cookies.