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DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work
Názov DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work Autor Weigand Hannah Spoluautori Beermann Arne Čiampor Fedor SAVBOTAN - Botanický ústav SAV ORCID Costa Filipe Csabai Zoltán Duarte Sofia Geiger Matthias F. Grabowski Michael Rimet Frédéric Rulik Björn Strand Malin Szucsich Nikolaus Weigand Alexander M. Willassen Endre Wyler Sofia A. Bouchez Agnès Borja Ángel Čiamporová-Zaťovičová Zuzana SAVBOTAN - Botanický ústav SAV ORCID Ferreira Sónia Dijkstra Klaas-Douwe B. Eisendle Ursula Freyhof Jörg Gadawski Piotr Graf Wolfram Haegerbaeumer Arne Hoorn Berry B. van der Japoshvili Bella Keresztes Lujza Keskin Emre Leese Florian Macher Jan N. Mamos Tomasz Paz Guy Pešić Vladimír Pfannkuchen Daniela Maric Pfannkuchen Martin Andreas Price Benjamin W. Rinkevich Buki Teixeira Marcos A.L. Várbíró Gábor Ekrem Torbjørn Zdroj.dok. Science of the Total Environment. Vol. 678 (2019), p. 499-524 Jazyk dok. eng - angličtina Krajina NL - Holandsko Druh dok. rozpis článkov z periodík (rbx) Heslá DNA barcoding * Reference library * Biological monitoring * Freshwater * Marine * Quality assurance Ohlasy SCHENK, Janina - GEISEN, Stefan - KLEINBOELTING, Nils - TRAUNSPURGER, Walter. Metabarcoding data allow for reliable biomass estimates in the most abundant animals on earth. In Metabarcoding and Metagenomics. 2019, vol. 3, p. 117-126. KELLY, Martyn. Adapting the (fast-moving) world of molecular ecology to the (slow-moving) world of environmental regulation: lessons from the UK diatom metabarcoding exercise. In Metabarcoding and Metagenomics. 2019, vol. 3, p. 127-135. BUSH, Alex - COMPSON, Zacchaeus G. - MONK, Wendy A. - PORTER, Teresita M. - STEEVES, Royce - EMILSON, Erik - GAGNE, Nellie - HAJIBABAEI, Mehrdad - ROY, Mélanie - BAIRD, Donald J. Studying Ecosystems With DNA Metabarcoding: Lessons From Biomonitoring of Aquatic Macroinvertebrates. In Frontiers in Ecology and Evolution, 2019, vol. 7, art. no. 434 FERNÁNDEZ, S., RODRÍGUEZ‐MARTÍNEZ, S., GARCIA‐VAZQUEZ, E. & ARDURA, A. How can eDNA contribute in riverine macroinvertebrate assessment? A metabarcoding approach in the Nalón River (Asturias, Northern Spain). In Environmental DNA, vol. 1, p. 385-401. ISSN 2637-4943. SCHENK, J. - FONTANETO, D. Biodiversity analyses in freshwater meiofauna through DNA sequence data. In HYDROBIOLOGIA. ISSN 0018-8158, JUL 2020, vol. 847, no. 12, SI, p. 2597-2611. NICHOLS, S.J. - KEFFORD, B.J. - CAMPBELL, C.D. - BYLEMANS, J. - CHANDLER, E. - BRAY, J.P. - SHACKLETON, M. - ROBINSON, K.L. - CAREW, M.E. - FURLAN, E.M. Towards routine DNA metabarcoding of macroinvertebrates using bulk samples for freshwater bioassessment: Effects of debris and storage conditions on the recovery of target taxa. In FRESHWATER BIOLOGY. ISSN 0046-5070, APR 2020, vol. 65, no. 4, p. 607-620. LIU, M.X. - CLARKE, L.J. - BAKER, S.C. - JORDAN, G.J. - BURRIDGE, C.P. A practical guide to DNA metabarcoding for entomological ecologists. In ECOLOGICAL ENTOMOLOGY. ISSN 0307-6946, JUN 2020, vol. 45, no. 3, p. 373-385. ALTERMATT, F. - LITTLE, C.J. - MACHLER, E. - WANG, S.P. - ZHANG, X.W. - BLACKMAN, R.C. Uncovering the complete biodiversity structure in spatial networks: the example of riverine systems. In OIKOS. ISSN 0030-1299, MAY 2020, vol. 129, no. 5, p. 607-618. SUAREZ-MENENDEZ, M. - PLANES, S. - GARCIA-VAZQUEZ, E. - ARDURA, A. Early Alert of Biological Risk in a Coastal Lagoon Through eDNA Metabarcoding. In FRONTIERS IN ECOLOGY AND EVOLUTION. ISSN 2296-701X, FEB 28 2020, vol. 8. SCHENEKAR, T. - SCHLETTERER, M. - LECAUDEY, L.A. - WEISS, S.J. Reference databases, primer choice, and assay sensitivity for environmental metabarcoding: Lessons learnt from a re-evaluation of an eDNA fish assessment in the Volga headwaters. In RIVER RESEARCH AND APPLICATIONS. ISSN 1535-1459, SEP 2020, vol. 36, no. 7, p. 1004-1013. CZECHOWSKI, P. - STEVENS, M.I. - MADDEN, C. - WEINSTEIN, P. Steps towards a more efficient use of chironomids as bioindicators for freshwater bioassessment: Exploiting eDNA and other genetic tools. In ECOLOGICAL INDICATORS. ISSN 1470-160X, MAR 2020, vol. 110. FRAIJA-FERNANDEZ, N. - BOUQUIEAUX, M.C. - REY, A. - MENDIBIL, I. - COTANO, U. - IRIGOIEN, X. - SANTOS, M. - RODRIGUEZ-EZPELETA, N. Marine water environmental DNA metabarcoding provides a comprehensive fish diversity assessment and reveals spatial patterns in a large oceanic area. In ECOLOGY AND EVOLUTION. ISSN 2045-7758, JUL 2020, vol. 10, no. 14, p. 7560-7584. SPECCHIA, V. - TZAFESTA, E. - MARINI, G. - SCARCELLA, S. - D'ATTIS, S. - PINNA, M. Gap Analysis for DNA Barcode Reference Libraries for Aquatic Macroinvertebrate Species in the Apulia Region (Southeast of Italy). In JOURNAL OF MARINE SCIENCE AND ENGINEERING. JUL 2020, vol. 8, no. 7. ARRANZ, V. - PEARMAN, W.S. - AGUIRRE, J.D. - LIGGINS, L. MARES, a replicable pipeline and curated reference database for marine eukaryote metabarcoding. In SCIENTIFIC DATA. JUL 3 2020, vol. 7, no. 1. MARQUES, V. - GUERIN, P.E. - ROCLE, M. - VALENTINI, A. - MANEL, S. - MOUILLOT, D. - DEJEAN, T. Blind assessment of vertebrate taxonomic diversity across spatial scales by clustering environmental DNA metabarcoding sequences. In ECOGRAPHY. ISSN 0906-7590, DEC 2020, vol. 43, no. 12, p. 1779-1790. SEYMOUR, M. - EDWARDS, F.K. - COSBY, B.J. - KELLY, M.G. - DE BRUYN, M. - CARVALHO, G.R. - CREER, S. Executing multi-taxa eDNA ecological assessment via traditional metrics and interactive networks. In SCIENCE OF THE TOTAL ENVIRONMENT. ISSN 0048-9697, AUG 10 2020, vol. 729. PORTER, T.M. - HAJIBABAEI, M. Putting COI Metabarcoding in Context: The Utility of Exact Sequence Variants (ESVs) in Biodiversity Analysis. In FRONTIERS IN ECOLOGY AND EVOLUTION. ISSN 2296-701X, AUG 11 2020, vol. 8. SCHROEDER, A. - STANKOVIC, D. - PALLAVICINI, A. - GIONECHETTI, F. - PANSERA, M. - CAMATTI, E. DNA metabarcoding and morphological analysis - Assessment of zooplankton biodiversity in transitional waters. In MARINE ENVIRONMENTAL RESEARCH. ISSN 0141-1136, SEP 2020, vol. 160. FURLAN, E.M. - DAVIS, J. - DUNCAN, R.P. Identifying error and accurately interpreting environmental DNA metabarcoding results: A case study to detect vertebrates at arid zone waterholes. In MOLECULAR ECOLOGY RESOURCES. ISSN 1755-098X, SEP 2020, vol. 20, no. 5, SI, p. 1259-1276. MIYA, M. - GOTOH, R.O. - SADO, T. MiFish metabarcoding: a high-throughput approach for simultaneous detection of multiple fish species from environmental DNA and other samples. In FISHERIES SCIENCE. ISSN 0919-9268, NOV 2020, vol. 86, no. 6, p. 939-970. SCHENK, J. - HOSS, S. - BRINKE, M. - KLEINBOLTING, N. - BRUCHNER-HUTTEMANN, H. - TRAUNSPURGER, W. Nematodes as bioindicators of polluted sediments using metabarcoding and microscopic taxonomy. In ENVIRONMENT INTERNATIONAL. ISSN 0160-4120, OCT 2020, vol. 143. RAUPACH, M.J. - HANNIG, K. - MORINIERE, J. - HENDRICH, L. A DNA barcode library for ground beetles of Germany: the genus Agonum Bonelli, 1810 (Insecta, Coleoptera, Carabidae). In DEUTSCHE ENTOMOLOGISCHE ZEITSCHRIFT. ISSN 1435-1951, OCT 19 2020, vol. 67, no. 2, p. 197-207. OBST, M. - EXTER, K. - ALLCOCK, A.L. - ARVANITIDIS, C. - AXBERG, A. - BUSTAMANTE, M. - CANCIO, I. - CARREIRA-FLORES, D. - CHATZINIKOLAOU, E. - CHATZIGEORGIOU, G. - CHRISMAS, N. - CLARK, M.S. - COMTET, T. - DAILIANIS, T. - DAVIES, N. - DENEUDT, K. - DE CERIO, O.D. - FORTIC, A. - GEROVASILEIOU, V. - HABLUTZEL, P.I. - KEKLIKOGLOU, K. - KOTOULAS, G. - LASOTA, R. - LEITE, B.R. - LOISEL, S. - LEVEQUE, L. - LEVY, L. - MALACHOWICZ, M. - MAVRIC, B. - MEYER, C. - MORTELMANS, J. - NORKKO, J. - PADE, N. - POWER, A.M. - RAMSAK, A. - REISS, H. - SOLBAKKEN, J. - STOEHR, P.A. - SUNDBERG, P. - THYRRING, J. - TRONCOSO, J.S. - VIARD, F. - WENNE, R. - YPERIFANOU, E.L. - ZBAWICKA, M. - PAVLOUDI, C. A Marine Biodiversity Observation Network for Genetic Monitoring of Hard-Bottom Communities (ARMS-MBON). In FRONTIERS IN MARINE SCIENCE. NOV 30 2020, vol. 7. YANG, C.T. - ZHENG, Y.X. - TAN, S.J. - MENG, G.L. - RAO, W. - YANG, C.Q. - BOURNE, D.G. - O'BRIEN, P.A. - XU, J.Q. - LIAO, S. - CHEN, A. - CHEN, X.W. - JIA, X.R. - ZHANG, A.B. - LIU, S.L. Efficient COI barcoding using high throughput single-end 400bp sequencing. In BMC GENOMICS. ISSN 1471-2164, DEC 4 2020, vol. 21, no. 1. RAMIREZ, J.L. - ROSAS-PUCHURI, U. - CANEDO, R.M. - ALFARO-SHIGUETO, J. - AYON, P. - ZELADA-MAZMELA, E. - SICCHA-RAMIREZ, R. - VELEZ-ZUAZO, X. DNA barcoding in the Southeast Pacific marine realm: Low coverage and geographic representation despite high diversity. In PLOS ONE. ISSN 1932-6203, DEC 28 2020, vol. 15, no. 12. IBABE, Aitor - RAYON, Fernando - MARTINEZ, Jose Luis - GARCIA-VAZQUEZ, Eva. Environmental DNA from plastic and textile marine litter detects exotic and nuisance species nearby ports. In PLOS ONE. ISSN 1932-6203, 2020, vol. 15, no. 6, pp. Dostupné na: https://doi.org/10.1371/journal.pone.0228811. BEZMATERNYKH, D.M. - PUZANOV, A.V. - PAPINA, T.S. - KIRILLOV, V.V. - RYBKINA, I.D. - LOVTSKAYA, O.V. - KUZNYAK, YA.E. Prospects for improving the technology of environmental monitoring of surface waters in the Ob-Irtysh basin. In BULLETIN AB RGS [Izvestiya AO RGO – in Russian], 2020, vol. 2, no. 57, p. 49-58. ISSN 2410-1192. RAUPACH, M.J. DNA Barcoding enthüllt neue Arten und mögliche Hybride in der Wasserwanzenwelt Deutschlands (Heteroptera: Nepomorpha et Gerromorpha). In HETEROPTERON, vol. 60, 2020, p. 6-9. ISSN 1432-3761. SCHENEKAR, T. - SCHLETTERER, M. - WEISS, S. eDNA als neues Werkzeug für das Gewässermonitoring Potenzial und Rahmenbedingungen anhand ausgewählter Anwendungsbeispiele aus Österreich (eDNA as a novel tool for freshwater monitoring - potential and framework conditions - with case studies from Austria). In ÖsSTERR WASSER- UND ABFALLW, 2020, vol. 72, p. 155-164. ISSN 1613-7566 (in German). LIN, X.L. - MO, L.D. - BU, W.J. - WANG, X.H. The first comprehensive DNA barcode reference library of Chinese Tanytarsus (Diptera: Chironomidae) for environmental DNA metabarcoding. In DIVERSITY AND DISTRIBUTIONS. ISSN 1366-9516, OCT 2021, vol. 27, no. 10, SI, p. 1932-1941. MACHLER, E. - WALSER, J.C. - ALTERMATT, F. Decision-making and best practices for taxonomy-free environmental DNA metabarcoding in biomonitoring using Hill numbers. In MOLECULAR ECOLOGY. ISSN 0962-1083, JUL 2021, vol. 30, no. 13, SI, p. 3326-3339. MAUFFREY, F. - CORDIER, T. - APOTHELOZ-PERRET-GENTIL, L. - CERMAKOVA, K. - MERZI, T. - DELEFOSSE, M. - BLANC, P. - PAWLOWSKI, J. Benthic monitoring of oil and gas offshore platforms in the North Sea using environmental DNA metabarcoding. In MOLECULAR ECOLOGY. ISSN 0962-1083, JUL 2021, vol. 30, no. 13, SI, p. 3007-3022. HARPER, L.R. - HANDLEY, L.L. - SAYER, C.D. - READ, D.S. - BENUCCI, M. - BLACKMAN, R.C. - HILL, M.J. - HANFLING, B. Assessing the impact of the threatened crucian carp (Carassius carassius) on pond invertebrate diversity: A comparison of conventional and molecular tools. In MOLECULAR ECOLOGY. ISSN 0962-1083, JUL 2021, vol. 30, no. 13, SI, p. 3252-3269. MARTINS, F.M.S. - PORTO, M. - FEIO, M.J. - EGETER, B. - BONIN, A. - SERRA, S.R.Q. - TABERLET, P. - BEJA, P. Modelling technical and biological biases in macroinvertebrate community assessment from bulk preservative using multiple metabarcoding markers. In MOLECULAR ECOLOGY. ISSN 0962-1083, JUL 2021, vol. 30, no. 13, SI, p. 3221-3238. FICETOLA, G.F. - BOYER, F. - VALENTINI, A. - BONIN, A. - MEYER, A. - DEJEAN, T. - GABORIAUD, C. - USSEGLIO-POLATERA, P. - TABERLET, P. Comparison of markers for the monitoring of freshwater benthic biodiversity through DNA metabarcoding. In MOLECULAR ECOLOGY. ISSN 0962-1083, JUL 2021, vol. 30, no. 13, SI, p. 3189-3202. VAN DER LOOS, L.M. - NIJLAND, R. Biases in bulk: DNA metabarcoding of marine communities and the methodology involved. In MOLECULAR ECOLOGY. ISSN 0962-1083, JUL 2021, vol. 30, no. 13, SI, p. 3270-3288. GALIMBERTI, A. - ASSANDRI, G. - MAGGIONI, D. - RAMAZZOTTI, F. - BARONI, D. - BAZZI, G. - CHIANDETTI, I. - CORSO, A. - FERRI, V. - GALUPPI, M. - ILAHIANE, L. - LA PORTA, G. - LADDAGA, L. - LANDI, F. - MASTROPASQUA, F. - RAMELLINI, S. - SANTINELLI, R. - SOLDATO, G. - SURDO, S. - CASIRAGHI, M. Italian odonates in the Pandora's box: A comprehensive DNA barcoding inventory shows taxonomic warnings at the Holarctic scale. In MOLECULAR ECOLOGY RESOURCES. ISSN 1755-098X, JAN 2021, vol. 21, no. 1, p. 183-200. TRAUGOTT, M. - THALINGER, B. - WALLINGER, C. - SINT, D. Fish as predators and prey:DNA-based assessment of their role in food webs. In JOURNAL OF FISH BIOLOGY. ISSN 0022-1112, FEB 2021, vol. 98, no. 2, SI, p. 367-382. ALSHARI, Norli Fauzani Mohd Abu Hassan - AHMAD, Siti Zuliana - AZLAN, Azali - LEE, Youn-Ho - AZZAM, Ghows - NOR, Siti Azizah Mohd. Metabarcoding of Fish Larvae in the Merbok River Reveals Species Diversity and Distribution Along its Mangrove Environment. In ZOOLOGICAL STUDIES. ISSN 1021-5506, DEC 22 2021, vol. 60. LI, Feilong - ZHANG, Yan - ALTERMATT, Florian - ZHANG, Xiaowei. Consideration of Multitrophic Biodiversity and Ecosystem Functions Improves Indices on River Ecological Status. In ENVIRONMENTAL SCIENCE & TECHNOLOGY. ISSN 0013-936X, DEC 21 2021, vol. 55, no. 24, p. 16434-16444. MARTIN, Jessica - GAMBAIANI, Delphine - SABATTE, Marie-Aurelia - PELORCE, Jacques - VALENTINI, Alice - DEJEAN, Tony - DARMON, Gaelle - MIAUD, Claude. A comparison of visual observation and DNA metabarcoding to assess the diet of juvenile sea turtle Caretta caretta in the French Mediterranean sea. In MARINE AND FRESHWATER RESEARCH. ISSN 1323-1650, 2021, vol. 73, no. 4, p. 552-560. ZANGARO, Francesco - SACCOMANNO, Benedetta - TZAFESTA, Eftychia - BOZZEDA, Fabio - SPECCHIA, Valeria - PINNA, Maurizio. Current limitations and future prospects of detection and biomonitoring of NIS in the Mediterranean Sea through environmental DNA. In NEOBIOTA. ISSN 1619-0033, DEC 14 2021, vol. 70, p. 151-165. MUGNAI, Francesco - MEGLECZ, Emese - COSTANTINI, Federica - ABBIATI, Marco - BAVESTRELLO, Giorgio - BERTASI, Fabio - BO, Marzia - CAPA, Maria - CHENUIL, Anne - COLANGELO, Marina Antonia - DE CLERCK, Olivier - GUTIERREZ, Jose Miguel - LATTANZI, Loretta - LEDUC, Michele - MARTIN, Daniel - MATTERSON, Kenan Oguz - MIKAC, Barbara - PLAISANCE, Laetitia - PONTI, Massimo - RIESGO, Ana - ROSSI, Vincent - TURICCHIA, Eva - WAESCHENBACH, Andrea - WANGENSTEEN, Owen S. Are well-studied marine biodiversity hotspots still blackspots for animal barcoding?. In GLOBAL ECOLOGY AND CONSERVATION. DEC 2021, vol. 32. JAZDZEWSKA, Anna Maria - TANDBERG, Anne Helene S. - HORTON, Tammy - BRIX, Saskia. Global gap-analysis of amphipod barcode library. In PEERJ. ISSN 2167-8359, NOV 4 2021, vol. 9. ZAFEIROPOULOS, Haris - GARGAN, Laura - HINTIKKA, Sanni - PAVLOUDI, Christina - CARLSSON, Jens. The Dark mAtteR iNvestigator (DARN) tool: getting to know the known unknowns in COI amplicon data. In Metabarcoding and Metagenomics. NOV 3 2021, vol. 5, p. 163-173. PINNA, Maurizio - SACCOMANNO, Benedetta - MARINI, Gabriele - ZANGARO, Francesco - KABAYEVA, Akbota - KHALAJ, Mina - SHAIMARDAN, Laura - D'ATTIS, Simona - TZAFESTA, Eftychia - SPECCHIA, Valeria. Testing the Influence of Incomplete DNA Barcode Libraries on Ecological Status Assessment of Mediterranean Transitional Waters. In BIOLOGY-BASEL. NOV 2021, vol. 10, no. 11. ELBRECHT, Vasco - BOURLAT, Sarah J. - HORREN, Thomas - LINDNER, Angie - MORDENTE, Adriana - NOLL, Niklas W. - SCHAFFLER, Livia - SORG, Martin - ZIZKA, Vera M. A. Pooling size sorted Malaise trap fractions to maximize taxon recovery with metabarcoding. In PEERJ. ISSN 2167-8359, OCT 5 2021, vol. 9. TURANOV, Sergei, V - KARTAVTSEV, Yuri Ph. A complement to DNA barcoding reference library for identification of fish from the Northeast Pacific. In GENOME. ISSN 0831-2796, OCT 2021, vol. 64, no. 10, p. 927-936. CAREW, Melissa E. - COLEMAN, Rhys A. - ROBINSON, Katie L. - HOFFMANN, Ary A. Using unsorted sweep-net samples to rapidly assess macroinvertebrate biodiversity. In FRESHWATER SCIENCE. ISSN 2161-9549, SEP 1 2021, vol. 40, no. 3, p. 551-565. BELLE, Christina C. - STOECKLE, Bernhard C. - CERWENKA, Alexander F. - KUEHN, Ralph - PANDER, Joachim - GEIST, Juergen P. Taxonomic requirements for better documenting and understanding biological invasions - the example of genetic weatherfish Misgurnus/Paramisgurnus sp. identification. In BIOINVASIONS RECORDS. ISSN 2242-1300, SEP 2021, vol. 10, no. 3, p. 506-520. ARDURA, A. - GONZALEZ-SANZ, A. - CLUSA, L. - PLANES, S. - GARCIA-VAZQUEZ, E. Beware of oysters. Rapid advance of non-native species in tropical Pacific islands. In MARINE ENVIRONMENTAL RESEARCH. ISSN 0141-1136, AUG 2021, vol. 170. COLLINS, Rupert A. - TRAUZZI, Giulia - MALTBY, Katherine M. - GIBSON, Thomas I. - RATCLIFFE, Frances C. - HALLAM, Jane - RAINBIRD, Sophie - MACLAINE, James - HENDERSON, Peter A. - SIMS, David W. - MARIANI, Stefano - GENNER, Martin J. Meta-Fish-Lib: A generalised, dynamic DNA reference library pipeline for metabarcoding of fishes. In JOURNAL OF FISH BIOLOGY. ISSN 0022-1112, OCT 2021, vol. 99, no. 4, p. 1446-1454. TURUNEN, Jarno - MYKRA, Heikki - ELBRECHT, Vasco - STEINKE, Dirk - BRAUKMANN, Thomas - AROVIITA, Jukka. The power of metabarcoding: Can we improve bioassessment and biodiversity surveys of stream macroinvertebrate communities?. In Metabarcoding and Metagenomics. JUL 28 2021, vol. 5, p. 99-110. MARTINS, Filipa M. S. - FEIO, Maria J. - PORTO, Miguel - FILIPE, Ana F. - BONIN, Aurelie - SERRA, Sonia R. Q. - ALVES, Paulo C. - TABERLET, Pierre - BEJA, Pedro. Assessing changes in stream macroinvertebrate communities across ecological gradients using morphological versus DNA metabarcoding approaches. In SCIENCE OF THE TOTAL ENVIRONMENT. ISSN 0048-9697, NOV 25 2021, vol. 797. MIQUELEIZ, Imanol - MIRANDA, Rafael - ARINO, Arturo H. - CANCELLARIO, Tommaso. Effective reassessments of freshwater fish species: a case study in a Mediterranean peninsula. In HYDROBIOLOGIA. ISSN 0018-8158, MAR 2022, vol. 849, no. 6, SI, p. 1339-1349. PAWLOWSKI, Jan - BONIN, Aurelie - BOYER, Frederic - CORDIER, Tristan - TABERLET, Pierre. Environmental DNA for biomonitoring. In MOLECULAR ECOLOGY. ISSN 0962-1083, JUL 2021, vol. 30, no. 13, SI, p. 2931-2936. BLATTNER, Lucas - EBNER, Joshua Niklas - ZOPFI, Jakob - VON FUMETTI, Stefanie. Targeted non-invasive bioindicator species detection in eDNA water samples to assess and monitor the integrity of vulnerable alpine freshwater environments. In ECOLOGICAL INDICATORS. ISSN 1470-160X, OCT 2021, vol. 129. LUE, Chia-Hua - BUFFINGTON, Matthew L. - SCHEFFER, Sonja - LEWIS, Matthew - ELLIOTT, Tyler A. - LINDSEY, Amelia R., I - DRISKELL, Amy - JANDOVA, Anna - KIMURA, Masahito T. - CARTON, Yves - KULA, Robert R. - SCHLENKE, Todd A. - MATEOS, Mariana - GOVIND, Shubha - VARALDI, Julien - GUERRIERI, Emilio - GIORGINI, Massimo - WANG, Xingeng - HOELMER, Kim - DAANE, Kent M. - ABRAM, Paul K. - PARDIKES, Nicholas A. - BROWN, Joel J. - THIERRY, Melanie - POIRIE, Marylene - GOLDSTEIN, Paul - MILLER, Scott E. - TRACEY, W. Daniel - DAVIS, Jeremy S. - JIGGINS, Francis M. - WERTHEIM, Bregje - LEWIS, Owen T. - LEIPS, Jeff - STANICZENKO, Phillip P. A. - HRCEK, Jan. DROP: Molecular voucher database for identification of Drosophila parasitoids. In MOLECULAR ECOLOGY RESOURCES. ISSN 1755-098X, OCT 2021, vol. 21, no. 7, p. 2437-2454. SIRIWUT, Warut - JERATTHITIKUL, Ekgachai - PANHA, Somsak - CHANABUN, Ratmanee - NGOR, Peng Bun - SUTCHARIT, Chirasak. Evidence of cryptic diversity in freshwater Macrobrachium prawns from Indochinese riverine systems revealed by DNA barcode, species delimitation and phylogenetic approaches. In PLOS ONE. ISSN 1932-6203, JUN 2 2021, vol. 16, no. 6. ISOLA, Daniela - BARTOLI, Flavia - LANGONE, Simone - CESCHIN, Simona - ZUCCONI, Laura - CANEVA, Giulia. Plant DNA Barcode as a Tool for Root Identification in Hypogea: The Case of the Etruscan Tombs of Tarquinia (Central Italy). In PLANTS-BASEL. JUN 2021, vol. 10, no. 6. DESCOTEAUX, Raphaelle - ERSHOVA, Elizaveta - WANGENSTEEN, Owen S. - PRAEBEL, Kim - RENAUD, Paul E. - COTTIER, Finlo - BLUHM, Bodil A. Meroplankton Diversity, Seasonality and Life-History Traits Across the Barents Sea Polar Front Revealed by High-Throughput DNA Barcoding. In FRONTIERS IN MARINE SCIENCE. MAY 28 2021, vol. 8. BLACKMAN, Rosetta C. - OSATHANUNKUL, Maslin - BRANTSCHEN, Jeanine - DI MURI, Cristina - HARPER, Lynsey R. - MACHLER, Elvira - HANFLING, Bernd - ALTERMATT, Florian. Mapping biodiversity hotspots of fish communities in subtropical streams through environmental DNA. In SCIENTIFIC REPORTS. ISSN 2045-2322, MAY 14 2021, vol. 11, no. 1. NISTAL-GARCIA, Alejandro - GARCIA-GARCIA, Pedro - GARCIA-GIRON, Jorge - BORREGO-RAMOS, Maria - BLANCO, Saul - BECARES, Eloy. DNA metabarcoding and morphological methods show complementary patterns in the metacommunity organization of lentic epiphytic diatoms. In SCIENCE OF THE TOTAL ENVIRONMENT. ISSN 0048-9697, SEP 10 2021, vol. 786. IBABE, A. - MIRALLES, L. - CARLEOS, C. E. - SOTO-LOPEZ, V. - MENENDEZ-TELENA, D. - BARTOLOME, M. - MONTES, H. J. - GONZALEZ, M. - DOPICO, E. - GARCIA-VAZQUEZ, E. - BORRELL, Y. J. Building on gAMBI in ports for a challenging biological invasions scenario: Blue-gNIS as a proof of concept. In MARINE ENVIRONMENTAL RESEARCH. ISSN 0141-1136, JUL 2021, vol. 169. GE, Yihao - XIA, Chengxing - WANG, Jun - ZHANG, Xiujie - MA, Xufa - ZHOU, Qiong. The efficacy of DNA barcoding in the classification, genetic differentiation, and biodiversity assessment of benthic macroinvertebrates. In ECOLOGY AND EVOLUTION. ISSN 2045-7758, MAY 2021, vol. 11, no. 10, p. 5669-5681. SHADRIN, D. M. DNA Barcoding: Applications. In RUSSIAN JOURNAL OF GENETICS. ISSN 1022-7954, APR 2021, vol. 57, no. 4, p. 489-497. GARCIA-VAZQUEZ, Eva - GEORGES, Oriane - FERNANDEZ, Sara - ARDURA, Alba. eDNA metabarcoding of small plankton samples to detect fish larvae and their preys from Atlantic and Pacific waters. In SCIENTIFIC REPORTS. ISSN 2045-2322, MAR 31 2021, vol. 11, no. 1. VALDIVIA-CARRILLO, Tania - ROCHA-OLIVARES, Axayacatl - REYES-BONILLA, Hector - DOMINGUEZ-CONTRERAS, Jose Francisco - MUNGUIA-VEGA, Adrian. Integrating eDNA metabarcoding and simultaneous underwater visual surveys to describe complex fish communities in a marine biodiversity hotspot. In MOLECULAR ECOLOGY RESOURCES. ISSN 1755-098X, JUL 2021, vol. 21, no. 5, p. 1558-1574. MARQUES, Virginie - MILHAU, Tristan - ALBOUY, Camille - DEJEAN, Tony - MANEL, Stephanie - MOUILLOT, David - JUHEL, Jean-Baptiste. GAPeDNA: Assessing and mapping global species gaps in genetic databases for eDNA metabarcoding. In DIVERSITY AND DISTRIBUTIONS. ISSN 1366-9516, OCT 2021, vol. 27, no. 10, SI, p. 1880-1892. SHACKLETON, M. E. - DAFFORN, K. A. - MURPHY, N. P. - GREENFIELD, P. - CASSIDY, M. - BESLEY, C. H. How does molecular taxonomy for deriving river health indices correlate with traditional morphological taxonomy?. In ECOLOGICAL INDICATORS. ISSN 1470-160X, JUN 2021, vol. 125. TZAFESTA, Eftychia - ZANGARO, Francesco - SPECCHIA, Valeria - PINNA, Maurizio. An Overview of DNA-Based Applications for the Assessment of Benthic Macroinvertebrates Biodiversity in Mediterranean Aquatic Ecosystems. In DIVERSITY-BASEL. MAR 2021, vol. 13, no. 3. COCLET, Clement - GARNIER, Cedric - D'ONOFRIO, Sebastien - DURRIEU, Gael - PASERO, Emilie - LE POUPON, Christophe - OMANOVIC, Dario - MULLOT, Jean-Ulrich - MISSON, Benjamin - BRIAND, Jean-Francois. Trace Metal Contamination Impacts Predicted Functions More Than Structure of Marine Prokaryotic Biofilm Communities in an Anthropized Coastal Area. In FRONTIERS IN MICROBIOLOGY. FEB 19 2021, vol. 12. MACHLER, Elvira - SALYANI, Anham - WALSER, Jean-Claude - LARSEN, Annegret - SCHAEFLI, Bettina - ALTERMATT, Florian - CEPERLEY, Natalie. Environmental DNA simultaneously informs hydrological and biodiversity characterization of an Alpine catchment. In HYDROLOGY AND EARTH SYSTEM SCIENCES. ISSN 1027-5606, FEB 18 2021, vol. 25, no. 2, p. 735-753. ALEXANDER, Jenna L. - MALHAM, Shelagh K. - SMYTH, David - WEBB, Julie - FIDLER, David - BAYFORD, Philippa - MCDONALD, James - LE VAY, Lewis. Improving quantification of bivalve larvae in mixed plankton samples using qPCR: A case study on Mytilus edulis. In AQUACULTURE. ISSN 0044-8486, FEB 15 2021, vol. 532. CHARLES, Donald F. - KELLY, Martyn G. - STEVENSON, R. Jan - POIKANE, Sandra - THEROUX, Susanna - ZGRUNDO, Aleksandra - CANTONATI, Marco. Benthic algae assessments in the EU and the US: Striving for consistency in the face of great ecological diversity. In ECOLOGICAL INDICATORS. ISSN 1470-160X, FEB 2021, vol. 121. SALES, Naiara Guimaraes - WANGENSTEEN, Owen Simon - CARVALHO, Daniel Cardoso - DEINER, Kristy - PRAEBEL, Kim - COSCIA, Ilaria - MCDEVITT, Allan D. - MARIANI, Stefano. Space-time dynamics in monitoring neotropical fish communities using eDNA metabarcoding. In SCIENCE OF THE TOTAL ENVIRONMENT. ISSN 0048-9697, FEB 1 2021, vol. 754. DE LUCA, Daniele - KOOISTRA, Wiebe H. C. F. - SARNO, Diana - BIFFALI, Elio - PIREDDA, Roberta. Empirical evidence for concerted evolution in the 18S rDNA region of the planktonic diatom genus Chaetoceros. In SCIENTIFIC REPORTS. ISSN 2045-2322, JAN 12 2021, vol. 11, no. 1. VALUYSKIKH, O. E. - SHADRIN, D. M. Phylogenetic position of Phlojodicarpus villosus (Apiaceae) based on ITS and trnH-psbA nucleotide sequences. In TURCZANINOWIA. ISSN 1560-7259, 2021, vol. 24, no. 4, p. 12-22. MALEWSKI, Tadeusz - DZIKOWSKI, Andrzej - SOLTYSZEWSKI, Ireneusz. MOLECULAR METHODS OF ANIMAL SPECIES IDENTIFICATION. In Polish Journal of Natural Sciences. ISSN 1643-9953, 2021, vol. 36, no. 1, p. 79-94. HALLERMAN, E. M. Applications and limitations of DNA barcoding in Environmental Biology. In JOURNAL OF ENVIRONMENTAL BIOLOGY. ISSN 0254-8704, JAN 2021, vol. 42, no. 1, p. 1-13. NETO, Luis - PINTO, Nadia - PROENCA, Alberto - AMORIM, Antonio - CONDE-SOUSA, Eduardo. 4SpecID: Reference DNA Libraries Auditing and Annotation System for Forensic Applications. In GENES. JAN 2021, vol. 12, no. 1. LIN, Yaojin - HU, Qinghua - LIU, Jinghua - ZHU, Xingquan - WU, Xindong. MULFE: Multi-Label Learning via Label-Specific Feature Space Ensemble. In ACM TRANSACTIONS ON KNOWLEDGE DISCOVERY FROM DATA. ISSN 1556-4681, JUN 2021, vol. 16, no. 1. Available at: https://doi.org/10.1145/3451392. POLANCO FERNÁNDEZ, Andrea - MARQUES, Virginie - FOPP, Fabian - JUHEL, Jean Baptiste - BORRERO-PÉREZ, Giomar Helena - CHEUTIN, Marie Charlotte - DEJEAN, Tony - GONZÁLEZ CORREDOR, Juan David - ACOSTA-CHAPARRO, Andrés - HOCDÉ, Régis - EME, David - MAIRE, Eva - SPESCHA, Manuel - VALENTINI, Alice - MANEL, Stéphanie - MOUILLOT, David - ALBOUY, Camille - PELLISSIER, Loïc. Comparing environmental DNA metabarcoding and underwater visual census to monitor tropical reef fishes. In Environmental DNA, 2021-01-01, 3, 1, pp. 142-156. Dostupné na: https://doi.org/10.1002/edn3.140. PEARMAN, John K. - VON AMMON, Ulla - LAROCHE, Olivier - ZAIKO, Anastasija - WOOD, Susanna A. - ZUBIA, Mayalen - PLANES, Serge - POCHON, Xavier. Metabarcoding as a tool to enhance marine surveillance of nonindigenous species in tropical harbors: A case study in Tahiti. In Environmental DNA, 2021-01-01, 3, 1, pp. 173-189. Dostupné na: https://doi.org/10.1002/edn3.154. PALACIOS MEJIA, Maura - CURD, Emily - EDALATI, Kiumars - RENSHAW, Mark A. - DUNN, Roy - POTTER, Daniel - FRAGA, Naomi - MOORE, Jenna - SAIZ, Justin - WAYNE, Robert - PARKER, Sophie S. The utility of environmental DNA from sediment and water samples for recovery of observed plant and animal species from four Mojave Desert springs. In Environmental DNA, 2021-01-01, 3, 1, pp. 214-230. Dostupné na: https://doi.org/10.1002/edn3.161. GILBEY, John - CARVALHO, Gary - CASTILHO, Rita - COSCIA, Ilaria - COULSON, Mark W. - DAHLE, Geir - DERYCKE, Sofie - FRANCISCO, Sara M. - HELYAR, Sarah J. - JOHANSEN, Torild - JUNGE, Claudia - LAYTON, Kara K.S. - MARTINSOHN, Jann - MATEJUSOVA, Iveta - ROBALO, Joana I. - RODRÍGUEZ-EZPELETA, Naiara - SILVA, Gonçalo - STRAMMER, Ilona - VASEMÄGI, Anti - VOLCKAERT, Filip A.M. Life in a drop: Sampling environmental DNA for marine fishery management and ecosystem monitoring. In Marine Policy, 2021-02-01, 124, pp. ISSN 0308597X. Dostupné na: https://doi.org/10.1016/j.marpol.2020.104331. JACKMAN, Jake M. - BENVENUTO, Chiara - COSCIA, Ilaria - OLIVEIRA CARVALHO, Cintia - READY, Jonathan S. - BOUBLI, Jean P. - MAGNUSSON, William E. - MCDEVITT, Allan D. - GUIMARÃES SALES, Naiara. eDNA in a bottleneck: Obstacles to fish metabarcoding studies in megadiverse freshwater systems. In Environmental DNA, 2021-07-01, 3, 4, pp. 837-849. Dostupné na: https://doi.org/10.1002/edn3.191. SCHIERWATER, Bernd - DESALLE, Rob. Invertebrate Zoology: A Tree of Life Approach. In Invertebrate Zoology: A Tree of Life Approach, 2021. 627 p. ISBN 978-148223582-1, 978-148223581-4. Dostupné na: https://doi.org/10.1201/9780429159053. POLANCO F., Andrea - RICHARDS, Eilísh - FLÜCK, Benjamin - VALENTINI, Alice - ALTERMATT, Florian - BROSSE, Sébastien - WALSER, Jean Claude - EME, David - MARQUES, Virginie - MANEL, Stéphanie - ALBOUY, Camille - DEJEAN, Tony - PELLISSIER, Loïc. Comparing the performance of 12S mitochondrial primers for fish environmental DNA across ecosystems. In Environmental DNA, 2021-11-01, 3, 6, pp. 1113-1127. Dostupné na: https://doi.org/10.1002/edn3.232. ASHFAQ, M. - KHAN, A.M. - RASOOL, A. - AKHTAR, S. - NAZIR, N. - AHMED, N. - MANZOOR, F. - SONES, J. - PEREZ, K. - SARWAR, G. - KHAN, A.A. - AKHTER, M. - SAEED, S. - SULTANA, R. - TAHIR, H.M. - RAFI, M.A. - IFTIKHAR, R. - NASEEM, M.T. - MASOOD, M. - TUFAIL, M. - KUMAR, S. - AFZAL, S. - MCKEOWN, J. - SAMEJO, A.A. - KHALIQ, I. - D'SOUZA, M.L. - MANSOOR, S. - HEBERT, P.D.N. A DNA barcode survey of insect biodiversity in Pakistan. In PEERJ. ISSN 2167-8359, APR 25 2022, vol. 10. Available at: https://doi.org/10.7717/peerj.13267. MIQUELEIZ, I. - MIRANDA, R. - ARIñO, A.H. - CANCELLARIO, T. Effective reassessments of freshwater fish species: a case study in a Mediterranean peninsula. In HYDROBIOLOGIA. ISSN 0018-8158, MAR 2022, vol. 849, no. 6, SI, p. 1339-1349. Available at: https://doi.org/10.1007/s10750-021-04644-4. FERNANDEZ, Sara - ARDURA, Alba - GEORGES, Oriane - MARTINEZ, Jose L. - SUAREZ-MENENDEZ, Marcos - PLANES, Serge - GARCIA-VAZQUEZ, Eva. Non-native species in the north Gulf of Aqaba (Red Sea) revealed from environmental DNA. In FRONTIERS IN MARINE SCIENCE. DEC 14 2022, vol. 9. Available at: https://doi.org/10.3389/fmars.2022.940889. WILLASSEN, Endre - WESTGAARD, Jon-Ivar - KONGSRUD, Jon Anders - HANEBREKKE, Tanja - BUHL-MORTENSEN, Pal - HOLTE, Borge. Benthic invertebrates in Svalbard fjords-when metabarcoding does not outperform traditional biodiversity assessment. In PEERJ. ISSN 2167-8359, NOV 17 2022, vol. 10. Available at: https://doi.org/10.7717/peerj.14321. WANG, Lijuan - WU, Zhihao - SUN, Guiqing - CHEN, Hui - LIU, Hongjun - YOU, Feng. The preliminary DNA barcoding dataset of fishes from Chinese coastal waters. In REGIONAL STUDIES IN MARINE SCIENCE. ISSN 2352-4855, NOV 2022, vol. 56. Available at: https://doi.org/10.1016/j.rsma.2022.102699. MENDOZA-RAMIREZ, Bryant H. - PAIZ-MEDINA, Lucia - SALVATIERRA-SUAREZ, Thelma - HERNANDEZ, Nelvia - HUETE-PEREZ, Jorge A. A survey of aquatic macroinvertebrates in a river from the dry corridor of Nicaragua using biological indices and DNA barcoding. In ECOLOGY AND EVOLUTION. ISSN 2045-7758, NOV 2022, vol. 12, no. 11. Available at: https://doi.org/10.1002/ece3.9487. SPECCHIA, Valeria - SACCOMANNO, Benedetta - ZANGARO, Francesco - TZAFESTA, Eftychia - PINNA, Maurizio. Exploring the Biodiversity of a European NATURA 2000 Mediterranean Lagoon through eDNA Metabarcoding. In DIVERSITY-BASEL. NOV 2022, vol. 14, no. 11. Available at: https://doi.org/10.3390/d14110991. JI, Chang Woo - OH, Hye-Ji - CHANG, Kwang-Hyeon - PARK, Young-Seuk - KWAK, Ihn-Sil. A Comparative Analyzing of Zooplankton Community Diversity in Surface Layer Water of Reservoir Via eDNA Metabarcoding and Microscopy. In DIVERSITY-BASEL. OCT 2022, vol. 14, no. 10. Available at: https://doi.org/10.3390/d14100797. HUANG, Songqian - YOSHITAKE, Kazutoshi - WATABE, Shugo - ASAKAWA, Shuichi. Environmental DNA study on aquatic ecosystem monitoring and management: Recent advances and prospects. In JOURNAL OF ENVIRONMENTAL MANAGEMENT. ISSN 0301-4797, DEC 1 2022, vol. 323. Available at: https://doi.org/10.1016/j.jenvman.2022.116310. TADMOR-LEVI, Roni - CUMMINGS, David - BOROVSKI, Tomer - SHAPIRA, Rachel - MARCOS-HADAD, Evgeniya - DAVID, Lior. A method for quick and efficient identification of cichlid species by high resolution DNA melting analysis of minibarcodes. In FRONTIERS IN ECOLOGY AND EVOLUTION. ISSN 2296-701X, SEP 15 2022, vol. 10. Available at: https://doi.org/10.3389/fevo.2022.1010838. GODUNKO, Roman J. - ALBA-TERCEDOR, Javier - GRABOWSKI, Michal - REWICZ, Tomasz - STANICZEK, Arnold H. Cenozoic origins of the genus iCalliarcys/i (Insecta, Ephemeroptera) revealed by Micro-CT, with DNA barcode gap analysis of Leptophlebiinae and Habrophlebiinae. In SCIENTIFIC REPORTS. ISSN 2045-2322, SEP 8 2022, vol. 12, no. 1. Available at: https://doi.org/10.1038/s41598-022-18234-4. TZAFESTA, Eftychia - SACCOMANNO, Benedetta - ZANGARO, Francesco - VADRUCCI, Maria Rosaria - SPECCHIA, Valeria - PINNA, Maurizio. DNA Barcode Gap Analysis for Multiple Marker Genes for Phytoplankton Species Biodiversity in Mediterranean Aquatic Ecosystems. In BIOLOGY-BASEL. SEP 2022, vol. 11, no. 9. Available at: https://doi.org/10.3390/biology11091277. YAO, Meng - ZHANG, Shan - LU, Qi - CHEN, Xiaoyu - ZHANG, Si-Yu - KONG, Yueqiao - ZHAO, Jindong. Fishing for fish environmental DNA: Ecological applications, methodological considerations, surveying designs, and ways forward. In MOLECULAR ECOLOGY. ISSN 0962-1083, OCT 2022, vol. 31, no. 20, p. 5132-5164. Available at: https://doi.org/10.1111/mec.16659. LOBANOV, Victor - GOBET, Angelique - JOYCE, Alyssa. Ecosystem-specific microbiota and microbiome databases in the era of big data. In ENVIRONMENTAL MICROBIOME. JUL 16 2022, vol. 17, no. 1. Available at: https://doi.org/10.1186/s40793-022-00433-1. COPILAS-CIOCIANU, Denis - REWICZ, Tomasz - SANDS, Arthur F. - PALATOV, Dmitry - MARIN, Ivan - ARBACIAUSKAS, Kestutis - HEBERT, Paul D. N. - GRABOWSKI, Michal - AUDZIJONYTE, Asta. A DNA barcode reference library for endemic Ponto-Caspian amphipods. In SCIENTIFIC REPORTS. ISSN 2045-2322, JUL 5 2022, vol. 12, no. 1. Available at: https://doi.org/10.1038/s41598-022-15442-w. GOVENDER, A. - GROENEVELD, J. C. - SINGH, S. P. - MUNRO, S. Willows. Metabarcoding of zooplankton confirms southwards dispersal of decapod crustacean species in the western Indian Ocean. In AFRICAN JOURNAL OF MARINE SCIENCE. ISSN 1814-232X, JUL 3 2022, vol. 44, no. 3, p. 279-289. Available at: https://doi.org/10.2989/1814232X.2022.2108144. JEFFERY, Nicholas W. - LEHNERT, Sarah J. - KESS, Tony - LAYTON, Kara K. S. - WRINGE, Brendan F. - STANLEY, Ryan R. E. Application of Omics Tools in Designing and Monitoring Marine Protected Areas For a Sustainable Blue Economy. In FRONTIERS IN GENETICS. JUN 22 2022, vol. 13. Available at: https://doi.org/10.3389/fgene.2022.886494. LI, Jing - WANG, Hao - LI, Chaolun. Single-Cell Sequencing on Marine Life: Application and Future Development. In FRONTIERS IN MARINE SCIENCE. JUN 21 2022, vol. 9. Available at: https://doi.org/10.3389/fmars.2022.906267. SHASHANK, Pathour R. - NAVEENA, Nadur L. - RAJGOPAL, Nernakallu N. - ELLIOTT, Tyler A. - SREEDEVI, Kolla - SUNIL, Sunil - MESHRAM, Naresh M. DNA barcoding of insects from India: Current status and future perspectives. In MOLECULAR BIOLOGY REPORTS. ISSN 0301-4851, NOV 2022, vol. 49, no. 11, p. 10617-10626. Available at: https://doi.org/10.1007/s11033-022-07628-2. SANCHEZ, Loic - BOULANGER, Emilie - ARNAL, Veronique - BOISSERY, Pierre - DALONGEVILLE, Alicia - DEJEAN, Tony - DETER, Julie - GUELLATI, Nacim - HOLON, Florian - JUHEL, Jean-Baptiste - LENFANT, Philippe - LEPRIEUR, Fabien - VALENTINI, Alice - MANEL, Stephanie - MOUILLOT, David. Ecological indicators based on quantitative eDNA metabarcoding: the case of marine reserves. In ECOLOGICAL INDICATORS. ISSN 1470-160X, JUL 2022, vol. 140. Available at: https://doi.org/10.1016/j.ecolind.2022.108966. TADMOR-LEVI, Roni - BOROVSKI, Tomer - MARCOS-HADAD, Evgeniya - SHAPIRO, James - HULATA, Gideon - GOLANI, Daniel - DAVID, Lior. Establishing and using a genetic database for resolving identification of fish species in the Sea of Galilee, Israel. In PLOS ONE. ISSN 1932-6203, MAY 19 2022, vol. 17, no. 5. Available at: https://doi.org/10.1371/journal.pone.0267021. ZHONG, Wenjun - ZHANG, Jinyong - WANG, Zhihao - LIN, Jianqing - HUANG, Xiangyun - LIU, Wenhua - LI, Hongjun - PELLISSIER, Loic - ZHANG, Xiaowei. Holistic Impact Evaluation of Human Activities on the Coastal Fish Biodiversity in the Chinese Coastal Environment. In ENVIRONMENTAL SCIENCE & TECHNOLOGY. ISSN 0013-936X, MAY 17 2022, vol. 56, no. 10, p. 6574-6583. Available at: https://doi.org/10.1021/acs.est.2c01339. CAREW, Melissa E. - YOW, Wen Kyle - ROBINSON, Katie L. - COLEMAN, Rhys A. - HOFFMANN, Ary A. DNA barcoding and metabarcoding of highly diverse aquatic mites (Acarina) can improve their use in routine biological monitoring. In MARINE AND FRESHWATER RESEARCH. ISSN 1323-1650, 2022, vol. 73, no. 7, p. 900-914. Available at: https://doi.org/10.1071/MF21291. BAKONYI, Gabor - VASARHELYI, Tamas - SZABO, Borbala. Pollution impacts on water bugs (Nepomorpha, Gerromorpha): state of the art and their biomonitoring potential. In ENVIRONMENTAL MONITORING AND ASSESSMENT. ISSN 0167-6369, APR 2022, vol. 194, no. 4. Available at: https://doi.org/10.1007/s10661-022-09961-2. HEBERT, Raphael - MEGLECZ, Emese. NSDPY: A python package to download DNA sequences from NCBI. In SOFTWAREX. ISSN 2352-7110, JUN 2022, vol. 18. Available at: https://doi.org/10.1016/j.softx.2022.101038. STOOF-LEICHSENRING, Kathleen R. - HUANG, Sichao - LIU, Sisi - JIA, Weihan - LI, Kai - LIU, Xingqi - PESTRYAKOVA, Luidmila A. - HERZSCHUH, Ulrike. Sedimentary DNA identifies modern and past macrophyte diversity and its environmental drivers in high-latitude and high-elevation lakes in Siberia and China. In LIMNOLOGY AND OCEANOGRAPHY. ISSN 0024-3590, MAY 2022, vol. 67, no. 5, p. 1126-1141. Available at: https://doi.org/10.1002/lno.12061. LI, Feilong - ZHANG, Yuan - ALTERMATT, Florian - ZHANG, Xiaowei - CAI, Yanpeng - YANG, Zhifeng. Gap analysis for DNA-based biomonitoring of aquatic ecosystems in China. In ECOLOGICAL INDICATORS. ISSN 1470-160X, APR 2022, vol. 137. Available at: https://doi.org/10.1016/j.ecolind.2022.108732. GOSTEL, Morgan R. - KRESS, W. John. The Expanding Role of DNA Barcodes: Indispensable Tools for Ecology, Evolution, and Conservation. In DIVERSITY-BASEL. MAR 2022, vol. 14, no. 3. Available at: https://doi.org/10.3390/d14030213. HINZ, Shawn - COSTON-GUARINI, Jennifer - MARNANE, Michael - GUARINI, Jean-Marc. Evaluating eDNA for Use within Marine Environmental Impact Assessments. In JOURNAL OF MARINE SCIENCE AND ENGINEERING. MAR 2022, vol. 10, no. 3. Available at: https://doi.org/10.3390/jmse10030375. MAILLI, Amalia Aikaterini - JAKT, Lars Martin - REISS, Henning - KOPP, Martina Elizabeth - MOUM, Truls Borg. Exploring the potential of mRNA for taxonomic delineation of marine benthic eukaryotes. In MARINE GENOMICS. ISSN 1874-7787, APR 2022, vol. 62. Available at: https://doi.org/10.1016/j.margen.2022.100934. LIU, Xing - HAN, Jichang - LI, Yuhang - ZHU, Baohua - LI, Yun - PAN, Kehou. The Structure of the Seasonal Benthic Diatom Community and Its Relationship With Environmental Factors in the Yellow River Delta. In FRONTIERS IN MARINE SCIENCE. FEB 17 2022, vol. 9. Available at: https://doi.org/10.3389/fmars.2022.784238. MAIELLO, Giulia - TALARICO, Lorenzo - CARPENTIERI, Paolo - FRANCESCHINI, Simone - HARPER, Lynsey R. - NEAVE, Erika F. - RICKARDS, Olga - SBRANA, Alice - SHUM, Peter - VELTRE, Virginia - MARIANI, Stefano - RUSSO, Tommaso. Little samplers, big fleet: eDNA metabarcoding from commercial trawlers enhances ocean monitoring. In FISHERIES RESEARCH. ISSN 0165-7836, MAY 2022, vol. 249. Available at: https://doi.org/10.1016/j.fishres.2022.106259. BLACKMAN, Rosetta C. - BRANTSCHEN, Jeanine - WALSER, Jean-Claude - WUETHRICH, Remo - ALTERMATT, Florian. Monitoring invasive alien macroinvertebrate species with environmental DNA. In RIVER RESEARCH AND APPLICATIONS. ISSN 1535-1459, OCT 2022, vol. 38, no. 8, SI, p. 1400-1412. Available at: https://doi.org/10.1002/rra.3947. KECK, Francois - BLACKMAN, Rosetta C. - BOSSART, Raphael - BRANTSCHEN, Jeanine - COUTON, Marjorie - HURLEMANN, Samuel - KIRSCHNER, Dominik - LOCHER, Nadine - ZHANG, Heng - ALTERMATT, Florian. Meta-analysis shows both congruence and complementarity of DNA and eDNA metabarcoding to traditional methods for biological community assessment. In MOLECULAR ECOLOGY. ISSN 0962-1083, MAR 2022, vol. 31, no. 6, p. 1820-1835. Available at: https://doi.org/10.1111/mec.16364. LIN, Yaojin - HU, Qinghua - LIU, Jinghua - ZHU, Xingquan - WU, Xindong. MULFE: Multi-Label Learning via Label-Specific Feature Space Ensemble. In ACM TRANSACTIONS ON KNOWLEDGE DISCOVERY FROM DATA. ISSN 1556-4681, FEB 2022, vol. 16, no. 1. Available at: https://doi.org/10.1145/3451392. KNUDSEN, Steen Wilhelm - HESSELSOE, Martin - THAULOW, Jens - AGERSNAP, Sune - HANSEN, Brian Klitgaard - JACOBSEN, Magnus Wulff - BEKKEVOLD, Dorte - JENSEN, Soren K. S. - MOLLER, Peter Rask - ANDERSEN, Jesper H. Monitoring of environmental DNA from nonindigenous species of algae, dinoflagellates and animals in the North East Atlantic. In SCIENCE OF THE TOTAL ENVIRONMENT. ISSN 0048-9697, MAY 15 2022, vol. 821. Available at: https://doi.org/10.1016/j.scitotenv.2022.153093. KJAERANDSEN, Jostein. Current State of DNA Barcoding of Sciaroidea (Diptera)-Highlighting the Need to Build the Reference Library. In INSECTS. FEB 2022, vol. 13, no. 2. Available at: https://doi.org/10.3390/insects13020147. XIONG, Fan - SHU, Lu - ZENG, Honghui - GAN, Xiaoni - HE, Shunping - PENG, Zuogang. Methodology for fish biodiversity monitoring with environmental DNA metabarcoding: The primers, databases and bioinformatic pipelines. In WATER BIOLOGY AND SECURITY. FEB 2022, vol. 1, no. 1. Available at: https://doi.org/10.1016/j.watbs.2022.100007. POUCHON, Charles - BOYER, Frederic - ROQUET, Cristina - DENOEUD, France - CHAVE, Jerome - COISSAC, Eric - ALSOS, Inger Greve - LAVERGNE, Sebastien. ORTHOSKIM: In silico sequence capture from genomic and transcriptomic libraries for phylogenomic and barcoding applications. In MOLECULAR ECOLOGY RESOURCES. ISSN 1755-098X, JUL 2022, vol. 22, no. 5, p. 2018-2037. Available at: https://doi.org/10.1111/1755-0998.13584. STEFANNI, Sergio - MIRIMIN, Luca - STANKOVIC, David - CHATZIEVANGELOU, Damianos - BONGIORNI, Lucia - MARINI, Simone - MODICA, Maria Vittoria - MANEA, Elisabetta - BONOFIGLIO, Federico - DEL RIO FERNANDEZ, Joaquin - CUKROV, Neven - GAVRILOVIC, Ana - DE LEO, Fabio C. - AGUZZI, Jacopo. Framing Cutting-Edge Integrative Deep-Sea Biodiversity Monitoring via Environmental DNA and Optoacoustic Augmented Infrastructures. In FRONTIERS IN MARINE SCIENCE. JAN 12 2022, vol. 08. Available at: https://doi.org/10.3389/fmars.2021.797140. KUMAR, Girish - REAUME, Ashley M. - FARRELL, Emily - GAITHER, Michelle R. Comparing eDNA metabarcoding primers for assessing fish communities in a biodiverse estuary. In PLOS ONE. ISSN 1932-6203, 2022, vol. 17, no. 6. Available at: https://doi.org/10.1371/journal.pone.0266720. ZAUPA, Silvia - FONTANETO, Diego - SABATINO, Raffaella - BOGGERO, Angela. Building a local reference library for metabarcoding survey of lake macrobenthos: oligochaetes and chironomids from Lake Maggiore. In Advances in Oceanography and Limnology, 2022-12-27, 13, 2, pp. art. no. 11051. ISSN 19475721. Dostupné na: https://doi.org/10.4081/aiol.2022.11051. WANG, Mingqiang - LUO, Arong - ZHOU, Qingsong - CHEN, Jingting - XIE, Tingting - LI, Yi - CHESTERS, Douglas - SHI, Xiaoyu - XIAO, Hui - LIU, Huanji - DING, Qiang - ZHOU, Xuan - LUO, Yiping - LU, Yuanyuan - TONG, Yijie - ZHAO, Zhengyu - BAI, Ming - GUO, Pengfei - CHEN, Sichong - NAKAMURA, Akihiro - PENG, Yanqiong - ZHAO, Yanhui - WEI, Shuhua - LIN, Xiaolong - CHEN, Huayan - LUO, Shixiao - LU, Yanhui - LU, Liang - YU, Jianping - ZHOU, Xin - ZOU, Yi - LU, Hao - ZHU, Chaodong. Research progress on insect diversity. In Biodiversity Science, 2022-10-20, 30, 10, pp. art. no. 22454. ISSN 10050094. Dostupné na: https://doi.org/10.17520/biods.2022454. KECK, François - HÜRLEMANN, Samuel - LOCHER, Nadine - STAMM, Christian - DEINER, Kristy - ALTERMATT, Florian. A triad of kicknet sampling, eDNA metabarcoding, and predictive modeling to assess richness of mayflies, stoneflies and caddisflies in rivers. In Metabarcoding and Metagenomics, 2022-01-01, 6, pp. 117-131. Dostupné na: https://doi.org/10.3897/mbmg.6.79351. NALLEY, Eileen M. - DONAHUE, Megan J. - TOONEN, Robert J. Metabarcoding as a tool to examine cryptic algae in the diets of two common grazing surgeonfishes, Acanthurus triostegus and A. nigrofuscus. In Environmental DNA, 2022-01-01, 4, 1, pp. 135-146. Dostupné na: https://doi.org/10.1002/edn3.206. SEYMOUR, Mathew. Environmental DNA Advancing Our Understanding and Conservation of Inland Waters. In Encyclopedia of Inland Waters, Second Edition, 2022-01-01, 4, pp. 685-698. ISBN 978-012822041-2, 978-012819166-8. Dostupné na: https://doi.org/10.1016/B978-0-12-819166-8.00070-0. MCGEE, Katie M. - ROBINSON, Chloe - PORTER, Teresita M. - COMPSON, Zacchaeus G. - HAJIBABAEI, Mehrdad - BAIRD, Donald J. eDNA and Bioassessment of Rivers. In Encyclopedia of Inland Waters, Second Edition, 2022-01-01, 2, pp. 537-548. ISBN 978-012822041-2, 978-012819166-8. Dostupné na: https://doi.org/10.1016/B978-0-12-819166-8.00131-6. JAMALUDDIN, Jamsari Amirul Firdaus - LAVOUÉ, Sébastien - ALSHARI, Norli Fauzani Mohd Abu Hassan - GHAZALI, Siti Zafirah binti - AHMAD, Amirrudin - TAN, Allen - LENG, Cheok Lay - MOHD NOR, Siti Azizah. Reassessing fish diversity of Penang Island’s freshwaters (northwest Peninsular Malaysia) through a molecular approach raises questions on its conservation status. In Biodiversity and Conservation, 2022-05-01, 31, 5-6, pp. 1551-1576. ISSN 09603115. Dostupné na: https://doi.org/10.1007/s10531-022-02409-6. ROZANSKI, Romane - TRENKEL, Verena M. - LORANCE, Pascal - VALENTINI, Alice - DEJEAN, Tony - PELLISSIER, Loïc - EME, David - ALBOUY, Camille. Disentangling the components of coastal fish biodiversity in southern Brittany by applying an environmental DNA approach. In Environmental DNA, 2022-07-01, 4, 4, pp. 920-939. Dostupné na: https://doi.org/10.1002/edn3.305. CHAUHAN, Archana - DOLMA, Phuntsog - ALI, Ahmad - KADWALIA, Anuragini - SOBTI, Ranbir Chander. Application of molecular phytogeny for the identification of species. In Biodiversity: Threats and Conservation, 2022-12-30, pp. 295-308. ISBN 978-100073894-0, 978-103211544-3. Dostupné na: https://doi.org/10.1201/9781003220398-19. Kategória ADCA - Vedecké práce v zahraničných karentovaných časopisoch impaktovaných Kategória (od 2022) V3 - Vedecký výstup publikačnej činnosti z časopisu Typ výstupu článok Rok vykazovania 2019 Registrované v WOS Registrované v SCOPUS Registrované v CCC DOI 10.1016/j.scitotenv.2019.04.247 
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Názov súboru Prístup Veľkosť Stiahnuté Typ Licence DNA barcode reference libraries for the monitoring.pdf Prístupný 13.3 MB 1 Vydavateľská verzia rok CC IF IF Q (best) JCR Av Jour IF Perc SJR SJR Q (best) CiteScore A rok vydania rok metriky IF IF Q (best) SJR SJR Q (best) 2019 2018 5.589 Q1 1.536 Q1
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